RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TOPORSQ9NS56 1045 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 CYSLTR2Q9NS75 346 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PIGVQ9NUD9 493 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TBC1D23Q9NUY8 699 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 DNAJC28Q9NX36 388 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SOHLH2Q9NX45 425 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ANKRD10Q9NXR5 420 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ARL15Q9NXU5 204 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 WSB2Q9NYS7 404 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 GGA3Q9NZ52 723 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 KLRF1Q9NZS2 232 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ABI3Q9P2A4 366 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 CHPF2Q9P2E5 772 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TBC1D29Q9UFV1 150 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 VPS51Q9UID3 782 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 HAO1Q9UJM8 370 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 DDX41Q9UJV9 622 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 CDC23Q9UJX2 597 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 GGA2Q9UJY4 613 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SERPINA10Q9UK55 444 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TRHDEQ9UKU6 1024 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ERVW-1Q9UQF0 538 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 POLHQ9Y253 713 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 R3HCC1Q9Y3T6 440 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PAXBP1Q9Y5B6 917 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PCDHGB5Q9Y5G0 923 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TEX264Q9Y6I9 313 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ADGRL1O94910 1474 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PLA2R1Q13018 1463 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 LMTK3Q96Q04 1460 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 MYCBP2O75592 4640 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 CACNA1CQ13936 2221 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 KCPQ6ZWJ8 1503 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 MST1RQ04912 1400 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PTPRCP08575 1304 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 IL16Q14005 1332 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PKHD1P08F94 4074 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 VWDEQ8N2E2 1590 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RPAP1Q9BWH6 1393 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 TRAV9-2A0A087WT02 112 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 A0A0A0MQY5 61 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 IGLV9-49A0A0B4J1Y8 123 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CCDC163A0A0D9SF12 145 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CCDC194A0A1B0GVG4 234 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 C7orf66A4D0T2 115 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SYNDIG1LA6NDD5 238 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 OR5K3A6NET4 321 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ZSCAN5CA6NGD5 496 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 LRRC14BA6NHZ5 514 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 OR6C76A6NM76 312 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM166BA8MTA8 275 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ANKRD66B4E2M5 251 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 H7C4K7 107 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 K7EQD1 137 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 DNM1LO00429 736 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 VILLO15195 856 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC16A6O15403 523 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 NUPL2O15504 423 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RRP8O43159 456 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 B4GALT5O43286 388 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RIPK2O43353 540 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 TXNL1O43396 289 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 AP1G1O43747 822 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 VEGFDO43915 354 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 KLK8O60259 260 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SYNCRIPO60506 623 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 KPNA6O60684 536 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 TSC22D2O75157 780 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FKBP6O75344 327 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 OFD1O75665 1012 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RHBDL1O75783 438 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CEACAM4O75871 244 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 MTA2O94776 668 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 BAIAP3O94812 1187 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 UBXN7O94888 489 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 GLSO94925 669 aaPredicted RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 INMTO95050 263 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 VENTXO95231 258 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 BMP10O95393 424 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ACSL3O95573 720 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FSTL3O95633 263 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 PIGRP01833 764 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 HSPB1P04792 205 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 SSBP05455 408 aaKnown RBP eCLIP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 HPNP05981 417 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 VIL1P09327 827 aaKnown RBP-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 GNAO1P09471 354 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM153BP0C7A2 387 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 RHOXF2BP0C7M4 288 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 FCGR2AP12318 317 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 ALADP13716 330 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 TYRP14679 529 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 BRAFP15056 766 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CTPS1P17812 591 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 HNF1AP20823 631 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 AGXTP21549 392 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 CA6P23280 308 aa-0.39□□□□□ -2.47
TRAJ28-201ENST00000390509 GDI1P31150 447 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms