RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 C14orf119Q9NWQ9 140 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 SLC45A1Q9Y2W3 748 aa14.43□□□□□ -0.1
VPS9D1-201ENST00000389386 A0A0U1RQS6 177 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 MEN1O00255 615 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 CTDSP2O14595 271 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 SLC22A3O75751 556 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 ETV3P41162 512 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 MAGEA11P43364 429 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 SLC15A1P46059 708 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 POLR2JP52435 117 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 GRIK2Q13002 908 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 FAM110CQ1W6H9 321 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 ZNF789Q5FWF6 425 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 MARCH8Q5T0T0 291 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 RAB43Q86YS6 212 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 IFNL1Q8IU54 200 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 OR5K1Q8NHB7 308 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 NPLOC4Q8TAT6 608 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 FBXO30Q8TB52 745 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 SNAPC3Q92966 411 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 AIG1Q9NVV5 245 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 RAPGEFL1Q9UHV5 662 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 CITO14578 2027 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 MITFO75030 526 aaPredicted RBP14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 NPPAP01160 153 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 CYBBP04839 570 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 MRPL19P49406 292 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 EIF2B5Q13144 721 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 GRIK4Q16099 956 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 SMN1Q16637 294 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 RFX4Q33E94 735 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 SPATA19Q7Z5L4 167 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 ISCA2Q86U28 154 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 C7orf31Q8N865 590 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 PPTC7Q8NI37 304 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 KIF12Q96FN5 646 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 OR2A14Q96R47 310 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 ITPAQ9BY32 194 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 RANGRFQ9HD47 186 aaPredicted RBP14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 C12orf4Q9NQ89 552 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 POLR3BQ9NW08 1133 aaPredicted RBP14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 ZMAT5Q9UDW3 170 aaKnown RBP14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 PEX16Q9Y5Y5 336 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 PLXNB2O15031 1838 aa14.42□□□□□ -0.1
VPS9D1-201ENST00000389386 LOC110117498-PIK3R3F6TDL0 507 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 TSPAN1O60635 241 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 MRPS14O60783 128 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 SLC10A3P09131 477 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 IL7P13232 177 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 LCP1P13796 627 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 ITGA2P17301 1181 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 PFKLP17858 780 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 GADD45AP24522 165 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 TMEM132DQ14C87 1099 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 DLEU7Q6UYE1 221 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 GTF2H4Q92759 462 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 TEKT5Q96M29 485 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 FYTTD1Q96QD9 318 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 KATNBL1Q9H079 304 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 ACTR8Q9H981 624 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 PRDM8Q9NQV8 689 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 CCDC59Q9P031 241 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 RNF6Q9Y252 685 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 ORC6Q9Y5N6 252 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 PNMA8CA0A1B0GUJ8 204 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 MEIOCA2RUB1 952 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 MANSC4A6NHS7 340 aaPredicted RBP14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 LRRC14BA6NHZ5 514 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 AOC2O75106 756 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 ZNF780AO75290 641 aaPredicted RBP14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 DNTTP04053 509 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 ERCC2P18074 760 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 SCNN1AP37088 669 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 RFX2P48378 723 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 MTPNP58546 118 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 PITX1P78337 314 aaPredicted RBP14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 NFKB2Q00653 900 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 SLC14A2Q15849 920 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 SPANXN2Q5MJ10 180 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 FAM205BPQ63HN1 556 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 PLEKHH3Q7Z736 793 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 ZNF598Q86UK7 904 aaKnown RBP14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 EID3Q8N140 333 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 APPL2Q8NEU8 664 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 OR6J1Q8NGC5 347 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 SLC7A6Q92536 515 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 SLC39A13Q96H72 371 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 PPM1MQ96MI6 270 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 ROGDIQ9GZN7 287 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 GORASP2Q9H8Y8 452 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 CCNB1IP1Q9NPC3 277 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 DIABLOQ9NR28 239 aa14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 TRIP12Q14669 1992 aaPredicted RBP14.41□□□□□ -0.1
VPS9D1-201ENST00000389386 VPS4BO75351 444 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 SIX3O95343 332 aaPredicted RBP14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 PRR35P0CG20 571 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 MATKP42679 507 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 CTSKP43235 329 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 SULT1E1P49888 294 aa14.4□□□□□ -0.1
VPS9D1-201ENST00000389386 CRHR2Q13324 411 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms