RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 JMJD6Q6NYC1 403 aaPredicted RBP17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 FAM198BQ6UWH4 519 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 SNX20Q7Z614 316 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 SYTL1Q8IYJ3 562 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 OR1L3Q8NH93 324 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 PPP1R2P1Q96PQ5 205 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 FERD3LQ96RJ6 166 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 DHRS4Q9BTZ2 278 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 OR52A5Q9H2C5 316 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 MVB12BQ9H7P6 319 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 COG4Q9H9E3 785 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 VPS37BQ9H9H4 285 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 FEZ2Q9UHY8 353 aaPredicted RBP17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 EFR3BQ9Y2G0 817 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 SHANK1Q9Y566 2161 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 ICE1Q9Y2F5 2266 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 RP1L1Q8IWN7 2480 aaPredicted RBP17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 GSTM1P09488 218 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 ST6GAL1P15907 406 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 MAGEA1P43355 309 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 ZNF140P52738 457 aaPredicted RBP17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 GSTM4Q03013 218 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 RPA4Q13156 261 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 NCF4Q15080 339 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 ZNF658BQ4V348 819 aaPredicted RBP17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 C11orf63Q6NUN7 778 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 ZNF449Q6P9G9 518 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 SARM1Q6SZW1 724 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 FDCSPQ8NFU4 85 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 OR13C4Q8NGS5 318 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 NAT14Q8WUY8 206 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 IP6K3Q96PC2 410 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 SMAD5Q99717 465 aaKnown RBP17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 HEMGNQ9BXL5 484 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 SLC29A3Q9BZD2 475 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 GOLPH3Q9H4A6 298 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 ARNT2Q9HBZ2 717 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 PADI2Q9Y2J8 665 aa17.35■□□□□ 0.37
RPUSD3-201ENST00000383820 IGLV3-16A0A075B6K0 115 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 CCDC66A2RUB6 948 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 C2orf74A8MZ97 194 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 C9J4A7 227 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 AKR1B15C9JRZ8 316 aaPredicted RBP17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 E7EQ34 232 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 BTN3A3O00478 584 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 BTN3A1O00481 513 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 STK10O94804 968 aaKnown RBP17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 LCA5LO95447 670 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 SPTBP11277 2137 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 AGXTP21549 392 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 MARCKSL1P49006 195 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 ITGA1P56199 1179 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 ANKRD20A2Q5SQ80 823 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 CCDC181Q5TID7 509 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 ANKRD20A1Q5TYW2 823 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 ANKRD20A3Q5VUR7 823 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 RAB43Q86YS6 212 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 CDKL3Q8IVW4 592 aaPredicted RBP17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 ZBTB2Q8N680 514 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 Q8NA96 180 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 PNPLA2Q96AD5 504 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 LRRC45Q96CN5 670 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 TRAPPC9Q96Q05 1148 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 C17orf62Q9BQA9 187 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 APOL2Q9BQE5 337 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 NUDT9Q9BW91 350 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 SLC7A5P2Q9GIP4 190 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 SLAMF7Q9NQ25 335 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 ZDHHC3Q9NYG2 299 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 GPR83Q9NYM4 423 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 C5AR2Q9P296 337 aa17.34■□□□□ 0.37
RPUSD3-201ENST00000383820 ESPL1Q14674 2120 aa17.33■□□□□ 0.37
RPUSD3-201ENST00000383820 TRBV5-4A0A0C4DH59 114 aa17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 ZNF185O15231 689 aa17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 ZNF189O75820 626 aaPredicted RBP17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 DDAH2O95865 285 aa17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 PTMSP20962 102 aa17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 PSMB4P28070 264 aa17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 LMAN1P49257 510 aa17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 OTUD4Q01804 1114 aaKnown RBP17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 ZNF385CQ66K41 422 aaPredicted RBP17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 SLC6A19Q695T7 634 aa17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 AMIGO1Q86WK6 493 aa17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 OR52E1Q8NGJ3 308 aa17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 ACTL9Q8TC94 416 aa17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 KRT35Q92764 455 aa17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 SGSM3Q96HU1 749 aa17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 C10orf88Q9H8K7 445 aa17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 UTP20O75691 2785 aaKnown RBP17.33■□□□□ 0.36
RPUSD3-201ENST00000383820 H7C0S8 307 aa17.32■□□□□ 0.36
RPUSD3-201ENST00000383820 DDX3YO15523 660 aaKnown RBP17.32■□□□□ 0.36
RPUSD3-201ENST00000383820 ZNF749O43361 778 aa17.32■□□□□ 0.36
RPUSD3-201ENST00000383820 SEMA7AO75326 666 aa17.32■□□□□ 0.36
RPUSD3-201ENST00000383820 IGHEP01854 428 aa17.32■□□□□ 0.36
RPUSD3-201ENST00000383820 CD63P08962 238 aa17.32■□□□□ 0.36
RPUSD3-201ENST00000383820 RBP3P10745 1247 aa17.32■□□□□ 0.36
RPUSD3-201ENST00000383820 ACRV1P26436 265 aa17.32■□□□□ 0.36
RPUSD3-201ENST00000383820 PTPN7P35236 360 aa17.32■□□□□ 0.36
RPUSD3-201ENST00000383820 OLIG2Q13516 323 aa17.32■□□□□ 0.36
RPUSD3-201ENST00000383820 BOP1Q14137 746 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms