RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 PRLP01236 227 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 MAGEA10P43363 369 aaPredicted RBP15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 SLC44A4Q53GD3 710 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 BROXQ5VW32 411 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 OR10A6Q8NH74 314 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 SPATA17Q96L03 361 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 MBOAT4Q96T53 435 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 TSEN34Q9BSV6 310 aaKnown RBP15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 TRMT6Q9UJA5 497 aaKnown RBP15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 U3KQV3 271 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 KANSL1LA0AUZ9 987 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 C2orf81A6NN90 581 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 H0YAE9 185 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 BCL10O95999 233 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 FUT4P22083 530 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 CDH4P55283 916 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 RHOAP61586 193 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 ITGADQ13349 1161 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 FXNQ16595 210 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 DPY19L1Q2PZI1 675 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 SPARTQ8N0X7 666 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 PARP8Q8N3A8 854 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 TMEM169Q96HH4 297 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 ZNF583Q96ND8 569 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 AASSQ9UDR5 926 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 MAGEL2Q9UJ55 1249 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 INVSQ9Y283 1065 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 ATP11BQ9Y2G3 1177 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 STX16O14662 325 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 FFAR3O14843 346 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 GPR42O15529 346 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 KLK8O60259 260 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 DEAF1O75398 565 aaPredicted RBP15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 ANXA6P08133 673 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 HOXB8P17481 243 aaPredicted RBP15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 CD97P48960 835 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 TLE2Q04725 743 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 GRSF1Q12849 480 aaKnown RBP eCLIP15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 CRY1Q16526 586 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 GTDC1Q4AE62 458 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 AFTPHQ6ULP2 937 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 OR4F6Q8NGB9 312 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 GPR63Q9BZJ6 419 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 PFDN4Q9NQP4 134 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 LIMD1Q9UGP4 676 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 YIPF1Q9Y548 306 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 E5RI56 91 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 PTGES3LE9PB15 166 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 G3V2T6 193 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 LSM1O15116 133 aaKnown RBP15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 TBC1D4O60343 1298 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 GUCA1CO95843 209 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 RAP2AP10114 183 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 PKMP14618 531 aaKnown RBP15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 HMGA1P17096 107 aaKnown RBP15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 FSHRP23945 695 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 KPNA1P52294 538 aaPredicted RBP15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 MOGQ16653 247 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 CYP2A13Q16696 494 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 AP5B1Q2VPB7 878 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 GTF2IRD2BQ6EKJ0 949 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 LAIR2Q6ISS4 152 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 THAP5Q7Z6K1 395 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 DNAJB7Q7Z6W7 309 aaPredicted RBP15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 TMEM179BQ7Z7N9 219 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 GTF2IRD2Q86UP8 949 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 WFDC5Q8TCV5 224 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 PSKH2Q96QS6 385 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 MRPL9Q9BYD2 267 aaKnown RBP15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 C8orf4Q9NR00 106 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 FARSBQ9NSD9 589 aaKnown RBP15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 RIC8BQ9NVN3 520 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 TOR1BO14657 336 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 ANKRD28O15084 1053 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 VPS26AO75436 327 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 ZDHHC11BP0C7U3 371 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 GGT1P19440 569 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 TPD52P55327 224 aaPredicted RBP15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 IL2P60568 153 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 CYP4F8P98187 520 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 RELAQ04206 551 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 SPATS1Q496A3 300 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 SULT1C3Q6IMI6 304 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 SPESP1Q6UW49 350 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 ZDHHC13Q8IUH4 622 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 PHACTR4Q8IZ21 702 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 SLC43A3Q8NBI5 491 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 CLHC1Q8NHS4 586 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 BEGAINQ9BUH8 593 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 ELAC1Q9H777 363 aaKnown RBP15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 INIPQ9NRY2 104 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 FAM118AQ9NWS6 357 aa15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 PAK1IP1Q9NWT1 392 aaPredicted RBP15.97■□□□□ 0.15
NKX3-1-201ENST00000380871 OR7A17O14581 309 aa15.96■□□□□ 0.15
NKX3-1-201ENST00000380871 ABCB7O75027 752 aa15.96■□□□□ 0.15
NKX3-1-201ENST00000380871 CLDN11O75508 207 aa15.96■□□□□ 0.15
NKX3-1-201ENST00000380871 IDUAP35475 653 aa15.96■□□□□ 0.15
NKX3-1-201ENST00000380871 GDF5P43026 501 aa15.96■□□□□ 0.15
NKX3-1-201ENST00000380871 RPL38P63173 70 aaKnown RBP15.96■□□□□ 0.15
NKX3-1-201ENST00000380871 CHRNB3Q05901 458 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms