RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 PSMC3IPQ9P2W1 217 aaPredicted RBP12.37□□□□□ -0.43
SMN1-202ENST00000380707 CTNNAL1Q9UBT7 734 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 PADI4Q9UM07 663 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 PLAAQ9Y263 795 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 NFS1Q9Y697 457 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 SMIM23A6NLE4 172 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 PPM1DO15297 605 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 PHGDHO43175 533 aaKnown RBP12.36□□□□□ -0.43
SMN1-202ENST00000380707 WISP3O95389 354 aaPredicted RBP12.36□□□□□ -0.43
SMN1-202ENST00000380707 MATN4O95460 622 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 LDOC1O95751 146 aaPredicted RBP12.36□□□□□ -0.43
SMN1-202ENST00000380707 ALDOAP04075 364 aaKnown RBP12.36□□□□□ -0.43
SMN1-202ENST00000380707 CBSLP0DN79 551 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 MTHFD1P11586 935 aaKnown RBP12.36□□□□□ -0.43
SMN1-202ENST00000380707 STMN1P16949 149 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 ZNF37AP17032 561 aaPredicted RBP12.36□□□□□ -0.43
SMN1-202ENST00000380707 ATP5DP30049 168 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 CBSP35520 551 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 GMPRP36959 345 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 FASLGP48023 281 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 IL2P60568 153 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 RAB10P61026 200 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 DNAJC3Q13217 504 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 NR0B2Q15466 257 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 PIWIL4Q7Z3Z4 852 aaKnown RBP12.36□□□□□ -0.43
SMN1-202ENST00000380707 SLC9B2Q86UD5 537 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 IQCKQ8N0W5 287 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 CFAP61Q8NHU2 1237 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 ANKRD49Q8WVL7 239 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 CXorf40BQ96DE9 158 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 TSPAN17Q96FV3 270 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 POPDC3Q9HBV1 291 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 GPAMQ9HCL2 828 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 SLC40A1Q9NP59 571 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 SNX15Q9NRS6 342 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 NCKIPSDQ9NZQ3 722 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 LRIT1Q9P2V4 623 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 FTSJ1Q9UET6 329 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 TBK1Q9UHD2 729 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 RNF215Q9Y6U7 377 aa12.36□□□□□ -0.43
SMN1-202ENST00000380707 SPTBN4Q9H254 2564 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 EME2A4GXA9 379 aaPredicted RBP12.35□□□□□ -0.43
SMN1-202ENST00000380707 TRIM49D1C9J1S8 452 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 SLC30A4O14863 429 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 NUDT21O43809 227 aaKnown RBP12.35□□□□□ -0.43
SMN1-202ENST00000380707 KRT37O76014 449 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 VIPP01282 170 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 SNRPAP09012 282 aaKnown RBP12.35□□□□□ -0.43
SMN1-202ENST00000380707 SLC35E2BP0CK96 405 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 ENO3P13929 434 aaPredicted RBP12.35□□□□□ -0.43
SMN1-202ENST00000380707 H2AFXP16104 143 aaPredicted RBP12.35□□□□□ -0.43
SMN1-202ENST00000380707 GLB1P16278 677 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 CKMT2P17540 419 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 CNTFP26441 200 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 RPIAP49247 311 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 CSRP3P50461 194 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 HHEXQ03014 270 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 IFFO1Q0D2I5 559 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 RSPO4Q2I0M5 234 aaPredicted RBP12.35□□□□□ -0.43
SMN1-202ENST00000380707 PPM1JQ5JR12 505 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.35□□□□□ -0.43
SMN1-202ENST00000380707 GUSBP11Q6P575 273 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 NEK10Q6ZWH5 1172 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 TAOK1Q7L7X3 1001 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 TDRPQ86YL5 185 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 TRIM48Q8IWZ4 208 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 CYP4X1Q8N118 509 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 DEFB124Q8NES8 71 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 OR5AR1Q8NGP9 310 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 LINGO1Q96FE5 620 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 EURLQ9NYK6 297 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 ASF1AQ9Y294 204 aa12.35□□□□□ -0.43
SMN1-202ENST00000380707 COL5A1P20908 1838 aaPredicted RBP12.35□□□□□ -0.43
SMN1-202ENST00000380707 ASPMQ8IZT6 3477 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 TLDC2A0PJX2 215 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 CPED1A4D0V7 1026 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 FOXO6A8MYZ6 492 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 EIF3FO00303 357 aaPredicted RBP12.34□□□□□ -0.43
SMN1-202ENST00000380707 RASGRF2O14827 1237 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 CRABP2P29373 138 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 TYK2P29597 1187 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 RGS4P49798 205 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 SERPINB8P50452 374 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 DAB2P98082 770 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 PRKG2Q13237 762 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 TRIP6Q15654 476 aaKnown RBP12.34□□□□□ -0.43
SMN1-202ENST00000380707 PERM1Q5SV97 790 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 LGSNQ5TDP6 509 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 FBXO38Q6PIJ6 1188 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 RAPH1Q70E73 1250 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 ZNF761Q86XN6 746 aaPredicted RBP12.34□□□□□ -0.43
SMN1-202ENST00000380707 SPATA6LQ8N4H0 392 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 OR5K2Q8NHB8 316 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 MZB1Q8WU39 189 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 ASB11Q8WXH4 323 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 ISL2Q96A47 359 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 ZBTB9Q96C00 473 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 UBXN10Q96LJ8 280 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 FERD3LQ96RJ6 166 aa12.34□□□□□ -0.43
SMN1-202ENST00000380707 CDC6Q99741 560 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms