RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 PRRT3Q5FWE3 981 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 PHC3Q8NDX5 983 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 FAM76AQ8TAV0 307 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 ASB11Q8WXH4 323 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 KIAA1191Q96A73 305 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 MRPL57Q9BQC6 102 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 LRRC61Q9BV99 259 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 SMOC1Q9H4F8 434 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 TFB2MQ9H5Q4 396 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 SUSD2Q9UGT4 822 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 CIDEBQ9UHD4 219 aa13.79□□□□□ -0.2
HERPUD1-203ENST00000379792 TRBV23OR9-2A0A075B6M9 112 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 NEMP2A6NFY4 417 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 PDZK1P1A8MUH7 402 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 TM9SF1O15321 606 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 SDC3O75056 442 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 MPC1LP0DKB6 136 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 NME1P15531 152 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 IDSP22304 550 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 CTSKP43235 329 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 BLKP51451 505 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 ILF3Q12906 894 aaKnown RBP eCLIP13.78□□□□□ -0.22e-6■□□□□ 9.1
HERPUD1-203ENST00000379792 PHKG1Q16816 387 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 HHATQ5VTY9 493 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 TAF8Q7Z7C8 310 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 LCA5Q86VQ0 697 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 RMDN2Q96LZ7 410 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 MECRQ9BV79 373 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 MRPL46Q9H2W6 279 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 SCHIP1Q9P0W5 487 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 ACSL5Q9ULC5 683 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 RNF112Q9ULX5 631 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 RIF1Q5UIP0 2472 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 NCF1BA6NI72 391 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 NCF1CA8MVU1 366 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 UBXN8O00124 270 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 EIF3FO00303 357 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 KCNJ13O60928 360 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 RBP1P09455 135 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 SLC35G4P0C7Q5 338 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 NCF1P14598 390 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 ACADLP28330 430 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 ETV4P43268 484 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 KPNA2P52292 529 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 PLOD1Q02809 727 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 RPA4Q13156 261 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 LRP8Q14114 963 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 CLCA4Q14CN2 919 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 CCDC153Q494R4 210 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 DUS1LQ6P1R4 473 aaKnown RBP13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 SBSNQ6UWP8 590 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 NEK10Q6ZWH5 1172 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 UBE2R2Q712K3 238 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 PDZD3Q86UT5 571 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 GPSM1Q86YR5 675 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 SFTPA2Q8IWL1 248 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 STAG3L4Q8TBR4 150 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 GPBAR1Q8TDU6 330 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 LMX1AQ8TE12 382 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 INSM2Q96T92 566 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 ZDHHC5Q9C0B5 715 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 ARRDC1-AS1Q9H2J1 176 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 DPEP2Q9H4A9 486 aa13.78□□□□□ -0.2
HERPUD1-203ENST00000379792 KLHL33A6NCF5 533 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 OR52A4PA6NMU1 304 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 SUPT3HB4E1H0 165 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 TARM1B6A8C7 271 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 G3V2L1 256 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 SUPT3HO75486 399 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 MATN4O95460 622 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 CPA3P15088 417 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 KCNA4P22459 653 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 BDKRB1P46663 353 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 SLC18A1P54219 525 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 IL9RQ01113 521 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 DUOXA1Q1HG43 343 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 CCSMST1Q4G0I0 132 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 PEAR1Q5VY43 1037 aaPredicted RBP13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 TTC19Q6DKK2 380 aaPredicted RBP13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 MBOAT1Q6ZNC8 495 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 TAX1BP1Q86VP1 789 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 TFGQ92734 400 aaPredicted RBP13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 ATOH8Q96SQ7 321 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 GSDMCQ9BYG8 508 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 ACSS2Q9NR19 701 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 INTS9Q9NV88 658 aaKnown RBP13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 UCKL1Q9NWZ5 548 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 TAAR2Q9P1P5 351 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 PDE10AQ9Y233 779 aa13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 TNRC6BQ9UPQ9 1833 aaKnown RBP13.77□□□□□ -0.21
HERPUD1-203ENST00000379792 PRAMEF33A0A0G2JMD5 474 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 ARHGEF33A8MVX0 844 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 GFYI3L273 518 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 IFRD1O00458 451 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 DLX3O60479 287 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 KERAO60938 352 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 GUCA1CO95843 209 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 SERPINB4P48594 390 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 BNIP3Q12983 259 aa13.76□□□□□ -0.21
HERPUD1-203ENST00000379792 GRIK2Q13002 908 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms