RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 PQLC1Q8N2U9 271 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 TRAPPC9Q96Q05 1148 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 MTG2Q9H4K7 406 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 WDR26Q9H7D7 661 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 KLHL28Q9NXS3 571 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 DYTNA2CJ06 578 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 TULP3O75386 442 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 PEX2P28328 305 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 NTSP30990 170 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 RPL3P39023 403 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 ETV3P41162 512 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 ALDH6A1Q02252 535 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 MED27Q6P2C8 311 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 NCEH1Q6PIU2 408 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 RSPO2Q6UXX9 243 aaPredicted RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 TMEM26Q6ZUK4 368 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 ZNF438Q7Z4V0 828 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 PATL1Q86TB9 770 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 ZC3H7AQ8IWR0 971 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 KXD1Q9BQD3 176 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 CRISPLD1Q9H336 500 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 SFXN1Q9H9B4 322 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 ZNF334Q9HCZ1 680 aaPredicted RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 DHRS7Q9Y394 339 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 COPG1Q9Y678 874 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 TTC34A8MYJ7 566 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 ZW10O43264 779 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 PI15O43692 258 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 CYP7B1O75881 506 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 FAM58BPP0C7Q3 252 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 PRDX6P30041 224 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 CDKN2DP55273 166 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 ILF3Q12906 894 aaKnown RBP eCLIP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 CSTF3Q12996 717 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 TRIM71Q2Q1W2 868 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 ITPRIPL2Q3MIP1 535 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 ZNF805Q5CZA5 627 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 INTS11Q5TA45 600 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 PDE12Q6L8Q7 609 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 R3HCC1LQ7Z5L2 792 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 HEATR4Q86WZ0 1026 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 GALNT15Q8N3T1 639 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 MKS1Q9NXB0 559 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 DLEC1Q9Y238 1755 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 KLKB1P03952 638 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 PGFP49763 221 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 AGTR2P50052 363 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 AP1S2P56377 157 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 IL5RAQ01344 420 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 PTCHD3Q3KNS1 767 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 REP15Q6BDI9 236 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 ANKRD33Q7Z3H0 272 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 CYP4Z1Q86W10 505 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 PNPT1Q8TCS8 783 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 UTP15Q8TED0 518 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 DACT3Q96B18 629 aaPredicted RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 DACH2Q96NX9 599 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 KCNA7Q96RP8 456 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 TTLL2Q9BWV7 592 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 FBRSL1Q9HCM7 1045 aaKnown RBP13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 DZANK1Q9NVP4 752 aa13.93□□□□□ -0.18
SHROOM1-203ENST00000378679 HIDE1A8MVS5 230 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 SRCP12931 536 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 RGRP47804 291 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 FBXW4P57775 412 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 UBE3AQ05086 875 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 CCDC85BQ15834 202 aaPredicted RBP13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 FAM174BQ3ZCQ3 159 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 TECRLQ5HYJ1 363 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 SPESP1Q6UW49 350 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 EPGNQ6UW88 154 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 TSPAN33Q86UF1 283 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 HID1Q8IV36 788 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 LIX1Q8N485 282 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 OR9I1Q8NGQ6 314 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 TRMT2BQ96GJ1 504 aaKnown RBP13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 C12orf66Q96MD2 445 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 EBPLQ9BY08 206 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 TRIT1Q9H3H1 467 aaKnown RBP13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 GIMAP2Q9UG22 337 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 SLC7A8Q9UHI5 535 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 POMPQ9Y244 141 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 NUP205Q92621 2012 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 LINC00854A0A1B0GVQ3 168 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 VIPP01282 170 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 FESP07332 822 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 TLX1P31314 330 aaPredicted RBP13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 GGT5P36269 586 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 CCR3P51677 355 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 ERVK-8P63133 956 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 SEMA3BQ13214 749 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 TRIM16LQ309B1 348 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 NADSYN1Q6IA69 706 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 SPPL2CQ8IUH8 684 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 ADHFE1Q8IWW8 467 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 CHST14Q8NCH0 376 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 HCFC2Q9Y5Z7 792 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 GRXCR1A8MXD5 290 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 DYRK3O43781 588 aa13.92□□□□□ -0.18
SHROOM1-203ENST00000378679 HPGDP15428 266 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms