RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 OXR1Q8N573 874 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 NDUFA13Q9P0J0 144 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 RAP2CQ9Y3L5 183 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 FABP3P05413 133 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 FMO1Q01740 532 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 RPL6Q02878 288 aaKnown RBP13.9□□□□□ -0.18
TRIM13-202ENST00000378182 GKN2Q86XP6 184 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 EIF1ADQ8N9N8 165 aaKnown RBP13.9□□□□□ -0.18
TRIM13-202ENST00000378182 EZH1Q92800 747 aaPredicted RBP13.9□□□□□ -0.18
TRIM13-202ENST00000378182 USB1Q9BQ65 265 aaKnown RBP13.9□□□□□ -0.18
TRIM13-202ENST00000378182 CRTAC1Q9NQ79 661 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 CHRAC1Q9NRG0 131 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 SLC33A1O00400 549 aaPredicted RBP13.9□□□□□ -0.18
TRIM13-202ENST00000378182 HCAR3P49019 387 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 DNASE1L3Q13609 305 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 WASHC2DQ5SRD0 308 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 NXPE1Q8N323 547 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 LRRC52Q8N7C0 313 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 SCAMP5Q8TAC9 235 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 LNX1Q8TBB1 728 aaPredicted RBP13.9□□□□□ -0.18
TRIM13-202ENST00000378182 CKAP2Q8WWK9 683 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 PRDM16Q9HAZ2 1276 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 PCDH18Q9HCL0 1135 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 FANCFQ9NPI8 374 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 B3GAT2Q9NPZ5 323 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 NUP50Q9UKX7 468 aa13.9□□□□□ -0.18
TRIM13-202ENST00000378182 MYOCOSA0A1B0GUC4 107 aa13.9□□□□□ -0.19
TRIM13-202ENST00000378182 TBX18O95935 607 aa13.9□□□□□ -0.19
TRIM13-202ENST00000378182 ENPP2Q13822 863 aa13.9□□□□□ -0.19
TRIM13-202ENST00000378182 NTRK3Q16288 839 aa13.9□□□□□ -0.19
TRIM13-202ENST00000378182 CLEC12AQ5QGZ9 265 aa13.9□□□□□ -0.19
TRIM13-202ENST00000378182 SPATA19Q7Z5L4 167 aa13.9□□□□□ -0.19
TRIM13-202ENST00000378182 GPAT4Q86UL3 456 aa13.9□□□□□ -0.19
TRIM13-202ENST00000378182 IFNL1Q8IU54 200 aa13.9□□□□□ -0.19
TRIM13-202ENST00000378182 FOXRED2Q8IWF2 684 aa13.9□□□□□ -0.19
TRIM13-202ENST00000378182 CMTR2Q8IYT2 770 aaKnown RBP13.9□□□□□ -0.19
TRIM13-202ENST00000378182 PROKR2Q8NFJ6 384 aa13.9□□□□□ -0.19
TRIM13-202ENST00000378182 JPH3Q8WXH2 748 aaPredicted RBP13.9□□□□□ -0.19
TRIM13-202ENST00000378182 MFSD3Q96ES6 412 aa13.9□□□□□ -0.19
TRIM13-202ENST00000378182 EBF3Q9H4W6 596 aa13.9□□□□□ -0.19
TRIM13-202ENST00000378182 LOC100509620A0A075B734 347 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 AP5Z1O43299 807 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 METTL18O95568 372 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 RHBDL3P58872 404 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 TLE2Q04725 743 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 KLHL26Q53HC5 615 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 TXNDC8Q6A555 127 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 PTF1AQ7RTS3 328 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 ZNF598Q86UK7 904 aaKnown RBP13.89□□□□□ -0.19
TRIM13-202ENST00000378182 FBXW8Q8N3Y1 598 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 CAVIN3Q969G5 261 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 CLPTM1LQ96KA5 538 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 A0A1B0GVM2 712 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 TCAF2A6NFQ2 919 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 OTOL1A6NHN0 477 aaPredicted RBP13.89□□□□□ -0.19
TRIM13-202ENST00000378182 TRIM38O00635 465 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 NME6O75414 186 aaPredicted RBP13.89□□□□□ -0.19
TRIM13-202ENST00000378182 RPP14O95059 124 aaKnown RBP13.89□□□□□ -0.19
TRIM13-202ENST00000378182 ALPPP05187 535 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 MAN2A2P49641 1150 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 ECM1Q16610 540 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 AMER2Q8N7J2 671 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 ESAMQ96AP7 390 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 GPN1Q9HCN4 374 aaPredicted RBP13.89□□□□□ -0.19
TRIM13-202ENST00000378182 TLR9Q9NR96 1032 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 PCDHA2Q9Y5H9 948 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 C5orf60A6NFR6 353 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 ZNF878C9JN71 531 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 ENTPD1P49961 510 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 CCR8P51685 355 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 PPM1JQ5JR12 505 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 AAGABQ6PD74 315 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 ZNF227Q86WZ6 799 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 BTBD1Q9H0C5 482 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 GBA3Q9H227 469 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 STK16O75716 305 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 CDC123O75794 336 aaPredicted RBP13.89□□□□□ -0.19
TRIM13-202ENST00000378182 CST3P01034 146 aaPredicted RBP13.89□□□□□ -0.19
TRIM13-202ENST00000378182 IL23RQ5VWK5 629 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 CAND1Q86VP6 1230 aaKnown RBP13.89□□□□□ -0.19
TRIM13-202ENST00000378182 HAS1Q92839 578 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 AZIN2Q96A70 460 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 RADILQ96JH8 1075 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 VNN3Q9NY84 501 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 DERAQ9Y315 318 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 CHST10O43529 356 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 MMP20O60882 483 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 PSMG1O95456 288 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 LDOC1O95751 146 aaPredicted RBP13.89□□□□□ -0.19
TRIM13-202ENST00000378182 ALPIP09923 528 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 KIR3DL1P43629 444 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 ASMTP46597 345 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 PDGFRLQ15198 375 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 GDPD4Q6W3E5 623 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 ZNF717Q9BY31 904 aaPredicted RBP13.89□□□□□ -0.19
TRIM13-202ENST00000378182 EIF2B4Q9UI10 523 aaKnown RBP13.89□□□□□ -0.19
TRIM13-202ENST00000378182 FKBPLQ9UIM3 349 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 FKBP7Q9Y680 259 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 WNT6Q9Y6F9 365 aa13.89□□□□□ -0.19
TRIM13-202ENST00000378182 TEX46H3BTG2 121 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms