RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	FBXL8	Q96CD0	374 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	CCDC126	Q96EE4	140 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	PPP1R16A	Q96I34	528 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	EBF4	Q9BQW3	602 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	NUF2	Q9BZD4	464 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	PLGRKT	Q9HBL7	147 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	CLEC1B	Q9P126	229 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	SARDH	Q9UL12	918 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	DENND4C	Q5VZ89	1909 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	OR2AG2	A6NM03	316 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	H2AFY	O75367	372 aa	Known RBP	11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	IPO13	O94829	963 aa	Known RBP	11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	SIX3	O95343	332 aa	Predicted RBP	11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	TCF3	P15923	654 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	TIMP2	P16035	220 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	SPINT3	P49223	89 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	CYP2A13	Q16696	494 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	ZNF648	Q5T619	568 aa	Predicted RBP	11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	NXPE1	Q8N323	547 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	AP2M1	Q96CW1	435 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	SLC30A3	Q99726	388 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	MYLK	Q15746	1914 aa		11.49	□□□□□ -0.57
LMO7-204	ENST00000377499	ANKRD12	Q6UB98	2062 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499		A8MT66	165 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	C1QTNF3-AMACR	E9PGA6	284 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	SKIV2L2	P42285	1042 aa	Known RBP	11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	IL12RB1	P42701	662 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	KCNC3	Q14003	757 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	EIF4H	Q15056	248 aa	Known RBP	11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	AAK1	Q2M2I8	961 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	TECRL	Q5HYJ1	363 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	PARS2	Q7L3T8	475 aa	Known RBP	11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	PIWIL4	Q7Z3Z4	852 aa	Known RBP	11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	HSD11B1L	Q7Z5J1	315 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	GPSM1	Q86YR5	675 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	MCMBP	Q9BTE3	642 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	CADM1	Q9BY67	442 aa	Known RBP	11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	CLK4	Q9HAZ1	481 aa	Known RBP	11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	GIMAP4	Q9NUV9	329 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	COQ3	Q9NZJ6	369 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	SLC27A6	Q9Y2P4	619 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	PCDHB1	Q9Y5F3	818 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	TAF4	O00268	1085 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	KLHL41	O60662	606 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	MMP20	O60882	483 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	HMOX2	P30519	316 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	ELAVL3	Q14576	367 aa	Known RBP	11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	PDK3	Q15120	406 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	CCDC58	Q4VC31	144 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	CTSL3P	Q5NE16	218 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	SLC22A9	Q8IVM8	553 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	ETFBKMT	Q8IXQ9	262 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	POU5F2	Q8N7G0	328 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	PTER	Q96BW5	349 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	OMA1	Q96E52	524 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	EML4	Q9HC35	981 aa	Known RBP	11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	ANGPTL3	Q9Y5C1	460 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	CHD5	Q8TDI0	1954 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499		H3BMM5	538 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	FCHO1	O14526	889 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	TGDS	O95455	350 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	ENO1	P06733	434 aa	Known RBP	11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	C1S	P09871	688 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	OR56A5	P0C7T3	313 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	CD1D	P15813	335 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	FCAR	P24071	287 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	ACRV1	P26436	265 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	RPL5	P46777	297 aa	Known RBP	11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	TTLL9	Q3SXZ7	439 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	GPR33	Q49SQ1	333 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	SEL1L3	Q68CR1	1132 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	RAET1G	Q6H3X3	334 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	ISCA2	Q86U28	154 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	FAR2	Q96K12	515 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	BIRC8	Q96P09	236 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	GAS2L1	Q99501	681 aa	Predicted RBP	11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	B3GNT4	Q9C0J1	378 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	KCNK4	Q9NYG8	393 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	PRSS21	Q9Y6M0	314 aa		11.48	□□□□□ -0.57
LMO7-204	ENST00000377499	ATP5H	O75947	161 aa		11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	KCNC1	P48547	511 aa		11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	RPL14	P50914	215 aa	Known RBP	11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	PRKAA1	Q13131	559 aa		11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	TSTA3	Q13630	321 aa	Predicted RBP	11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	OR4D1	Q15615	310 aa		11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	RBBP7	Q16576	425 aa		11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	LYPLAL1	Q5VWZ2	237 aa		11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	GPR78	Q96P69	363 aa		11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	MIPEP	Q99797	713 aa		11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	WDR55	Q9H6Y2	383 aa	Predicted RBP	11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	SEMA4B	Q9NPR2	832 aa	Predicted RBP	11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	WDR70	Q9NW82	654 aa		11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	OBP2A	Q9NY56	170 aa		11.47	□□□□□ -0.57
LMO7-204	ENST00000377499	LIMD1	Q9UGP4	676 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 892.8 ms