RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 PSMD13Q9UNM6 376 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 R3HDM2Q9Y2K5 976 aaKnown RBP12.8□□□□□ -0.36
CLCN6-205ENST00000376492 CFAP20Q9Y6A4 193 aaKnown RBP12.8□□□□□ -0.36
CLCN6-205ENST00000376492 CACNA1DQ01668 2161 aa12.8□□□□□ -0.36
CLCN6-205ENST00000376492 UBA6A0AVT1 1052 aaPredicted RBP12.79□□□□□ -0.36
CLCN6-205ENST00000376492 OR5K3A6NET4 321 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 TLCD2A6NGC4 264 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 GPR39O43194 453 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 ANXA9O76027 345 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 HALP42357 657 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 ARCN1P48444 511 aaKnown RBP12.79□□□□□ -0.36
CLCN6-205ENST00000376492 GEMP55040 296 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 HSD11B2P80365 405 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 ABRQ12979 859 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 PLCL1Q15111 1095 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 SLC1A5Q15758 541 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 RPE65Q16518 533 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 ATP13A5Q4VNC0 1218 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 SEL1L2Q5TEA6 688 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 IZUMO3Q5VZ72 239 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 DUS1LQ6P1R4 473 aaKnown RBP12.79□□□□□ -0.36
CLCN6-205ENST00000376492 TICAM1Q8IUC6 712 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 D2HGDHQ8N465 521 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 PNPLA2Q96AD5 504 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 ZNF501Q96CX3 271 aaPredicted RBP12.79□□□□□ -0.36
CLCN6-205ENST00000376492 SNRNP40Q96DI7 357 aaKnown RBP12.79□□□□□ -0.36
CLCN6-205ENST00000376492 GORASP1Q9BQQ3 440 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 GPR63Q9BZJ6 419 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 RRAGDQ9NQL2 400 aaPredicted RBP12.79□□□□□ -0.36
CLCN6-205ENST00000376492 ASF1BQ9NVP2 202 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 CDC23Q9UJX2 597 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 SNX7Q9UNH6 387 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 AAR2Q9Y312 384 aaKnown RBP12.79□□□□□ -0.36
CLCN6-205ENST00000376492 SPO11Q9Y5K1 396 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 MED13Q9UHV7 2174 aa12.79□□□□□ -0.36
CLCN6-205ENST00000376492 PCSK5Q92824 1860 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 VCLP18206 1134 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 HLA-DPA1P20036 260 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 TNFRSF8P28908 595 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 STIP1P31948 543 aaKnown RBP12.78□□□□□ -0.36
CLCN6-205ENST00000376492 CTSCP53634 463 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 TERF1P54274 439 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 TMEM115Q12893 351 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-205ENST00000376492 ATP1A4Q13733 1029 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 NFE2L1Q14494 772 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 PRPSAP1Q14558 356 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 WHAMMP3Q1A5X7 153 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 PARP6Q2NL67 630 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 SIRPB2Q5JXA9 342 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 PLEKHS1Q5SXH7 462 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 KLHL35Q6PF15 583 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 RANBP10Q6VN20 620 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 BPHLQ86WA6 291 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-205ENST00000376492 KMT5CQ86Y97 462 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 KLHDC8BQ8IXV7 354 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 DSELQ8IZU8 1212 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 ZBTB2Q8N680 514 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 FAM71DQ8N9W8 422 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 IPMKQ8NFU5 416 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 GDAP1Q8TB36 358 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 CCDC110Q8TBZ0 833 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 PPP1R2P1Q96PQ5 205 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 VPS35Q96QK1 796 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 NAP1L3Q99457 506 aaPredicted RBP12.78□□□□□ -0.36
CLCN6-205ENST00000376492 CD180Q99467 661 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 TRABDQ9H4I3 376 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 RAD18Q9NS91 495 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 IMP3Q9NV31 184 aaKnown RBP12.78□□□□□ -0.36
CLCN6-205ENST00000376492 GPR83Q9NYM4 423 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 TCFL5Q9UL49 500 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 PCDHGB7Q9Y5F8 929 aa12.78□□□□□ -0.36
CLCN6-205ENST00000376492 F5H423 210 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-205ENST00000376492 MEN1O00255 615 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 LIASO43766 372 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 POP7O75817 140 aaKnown RBP12.77□□□□□ -0.37
CLCN6-205ENST00000376492 CBX6O95503 412 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 CAPN1P07384 714 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 MTHFD1P11586 935 aaKnown RBP12.77□□□□□ -0.37
CLCN6-205ENST00000376492 PSMB4P28070 264 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 PBLDP30039 288 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-205ENST00000376492 CA5AP35218 305 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 ADRA1AP35348 466 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 HMGCLP35914 325 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 CHRNA4P43681 627 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 TNNT3P45378 269 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-205ENST00000376492 KPNA2P52292 529 aaKnown RBP12.77□□□□□ -0.37
CLCN6-205ENST00000376492 DMPKQ09013 629 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 GTF2H3Q13889 308 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 OASLQ15646 514 aaKnown RBP12.77□□□□□ -0.37
CLCN6-205ENST00000376492 PLEKHN1Q494U1 663 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-205ENST00000376492 C1QL3Q5VWW1 255 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 FAM198BQ6UWH4 519 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 ZNF572Q7Z3I7 529 aaPredicted RBP12.77□□□□□ -0.37
CLCN6-205ENST00000376492 AMZ2Q86W34 360 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 SRRM1Q8IYB3 904 aaKnown RBP12.77□□□□□ -0.37
CLCN6-205ENST00000376492 CISD2Q8N5K1 135 aaKnown RBP12.77□□□□□ -0.37
CLCN6-205ENST00000376492 RASGEF1AQ8N9B8 481 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 RANBP9Q96S59 729 aa12.77□□□□□ -0.37
CLCN6-205ENST00000376492 SMAD5Q99717 465 aaKnown RBP12.77□□□□□ -0.37
CLCN6-205ENST00000376492 TMEM121Q9BTD3 319 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms