RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 SMYD1Q8NB12 490 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ZNF555Q8NEP9 628 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 SNX19Q92543 992 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 GLT1D1Q96MS3 346 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 CASD1Q96PB1 797 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 TBCDQ9BTW9 1192 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 TTPALQ9BTX7 342 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 APOL5Q9BWW9 433 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 MAGEE1Q9HCI5 957 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ZFP14Q9HCL3 533 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 FARSBQ9NSD9 589 aaKnown RBP14.28□□□□□ -0.12
MSH5-201ENST00000375703 ELOVL7A1L3X0 281 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 C16orf96A6NNT2 1141 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 NOBOXO60393 691 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ULK1O75385 1050 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 SEC22BO75396 215 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 SEC14L2O76054 403 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 SLC25A14O95258 325 aaPredicted RBP14.28□□□□□ -0.12
MSH5-201ENST00000375703 HNRNPCP07910 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
MSH5-201ENST00000375703 COL6A1P12109 1028 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 GNPDA1P46926 289 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 RHOAP61586 193 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 TUBA3CQ13748 450 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 NKG7Q16617 165 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 RGMBQ6NW40 437 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ZC3H7AQ8IWR0 971 aaKnown RBP14.28□□□□□ -0.12
MSH5-201ENST00000375703 LIX1Q8N485 282 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 CARNMT1Q8N4J0 409 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ZNF548Q8NEK5 533 aaPredicted RBP14.28□□□□□ -0.12
MSH5-201ENST00000375703 FBXO22Q8NEZ5 403 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 GIPC3Q8TF64 312 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 FAM162AQ96A26 154 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ACDQ96AP0 544 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 SLC47A1Q96FL8 570 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 RDH12Q96NR8 316 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 SH3GL1Q99961 368 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 BOCQ9BWV1 1114 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 OSBPL10Q9BXB5 764 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 CWH43Q9H720 699 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 FAIMQ9NVQ4 179 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 OPTCQ9UBM4 332 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 LHX3Q9UBR4 397 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 KLQ9UEF7 1012 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 OARD1Q9Y530 152 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ADAM12O43184 909 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 FZD6O60353 706 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 DGKAP23743 735 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 MZF1P28698 734 aaPredicted RBP14.28□□□□□ -0.12
MSH5-201ENST00000375703 C21orf59P57076 290 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ELAVL2Q12926 359 aaKnown RBP14.28□□□□□ -0.12
MSH5-201ENST00000375703 LAPTM5Q13571 262 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 MOGQ16653 247 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 IMPG1Q17R60 797 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 SPANXN4Q5MJ08 99 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ATXN7L2Q5T6C5 722 aaPredicted RBP14.28□□□□□ -0.12
MSH5-201ENST00000375703 CACHD1Q5VU97 1274 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 XAF1Q6GPH4 301 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 RNF180Q86T96 592 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ZNF554Q86TJ5 538 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 TRIM74Q86UV6 250 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 TRIM73Q86UV7 250 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 CLDN19Q8N6F1 224 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 BPIFB6Q8NFQ5 453 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 WBP2Q969T9 261 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 CD244Q9BZW8 370 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 LHPPQ9H008 270 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 IKZF5Q9H5V7 419 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ASB8Q9H765 288 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ACTR8Q9H981 624 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 LTB4R2Q9NPC1 389 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 WWOXQ9NZC7 414 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 ZNF490Q9ULM2 529 aaPredicted RBP14.28□□□□□ -0.12
MSH5-201ENST00000375703 TDRKHQ9Y2W6 561 aaKnown RBP14.28□□□□□ -0.12
MSH5-201ENST00000375703 FCF1Q9Y324 198 aaKnown RBP14.28□□□□□ -0.12
MSH5-201ENST00000375703 PCDHGA8Q9Y5G5 932 aa14.28□□□□□ -0.12
MSH5-201ENST00000375703 CXCR6O00574 342 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 PRKD3O94806 890 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 PRAMEF1O95521 474 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 IL6P05231 212 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 PGRP06401 933 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 ELNP15502 786 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 IL7RP16871 459 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 UGT1A1P22309 533 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 UGT1A4P22310 534 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 UGT1A3P35503 534 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 UGT1A5P35504 534 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 GGT5P36269 586 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 SKIV2LQ15477 1246 aaKnown RBP14.27□□□□□ -0.12
MSH5-201ENST00000375703 ARMC12Q5T9G4 340 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 HS3ST5Q8IZT8 346 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 GLB1L3Q8NCI6 653 aaPredicted RBP14.27□□□□□ -0.12
MSH5-201ENST00000375703 HDAC2Q92769 488 aaKnown RBP14.27□□□□□ -0.12
MSH5-201ENST00000375703 TANKQ92844 425 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 RNF38Q9H0F5 515 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 TBCCD1Q9NVR7 557 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 GNPTGQ9UJJ9 305 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 UTS2RQ9UKP6 389 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 INVSQ9Y283 1065 aa14.27□□□□□ -0.12
MSH5-201ENST00000375703 SCELO95171 688 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 TFPTP0C1Z6 253 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms