RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 V9GYQ6 96 aa11.96□□□□□ -0.5
C9orf3-203ENST00000375315 MYO18AQ92614 2054 aaKnown RBP11.96□□□□□ -0.5
C9orf3-203ENST00000375315 EFCAB9A8MZ26 197 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 PDPK1O15530 556 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 GSTM1P09488 218 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 ARSAP15289 507 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 NCK1P16333 377 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 CYP2A7P20853 494 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 FMO4P31512 558 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 OR1D2P34982 312 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 GSK3BP49841 420 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 DAOAP59103 153 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 TPRG1LQ5T0D9 272 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 NPAS4Q8IUM7 802 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 FUNDC1Q8IVP5 155 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 TCAIMQ8N3R3 496 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 TRIM43Q96BQ3 446 aaPredicted RBP11.95□□□□□ -0.5
C9orf3-203ENST00000375315 MRPL9Q9BYD2 267 aaKnown RBP11.95□□□□□ -0.5
C9orf3-203ENST00000375315 CRISPLD1Q9H336 500 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 POMKQ9H5K3 350 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 FBXL12Q9NXK8 326 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 TAS2R9Q9NYW1 312 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 STAP1Q9ULZ2 295 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 TARM1B6A8C7 271 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 CLTBP09497 229 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 TRAPPC2P0DI81 140 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 TRAPPC2BP0DI82 140 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 PRKCDQ05655 676 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 DSC1Q08554 894 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 GRM3Q14832 879 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 STARD3Q14849 445 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 ESCO2Q56NI9 601 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 PTRH1Q86Y79 214 aaKnown RBP11.95□□□□□ -0.5
C9orf3-203ENST00000375315 PARP16Q8N5Y8 322 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 BPIFB1Q8TDL5 484 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 BIRC7Q96CA5 298 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 LRRC58Q96CX6 371 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 KCTD15Q96SI1 283 aaPredicted RBP11.95□□□□□ -0.5
C9orf3-203ENST00000375315 PHOX2BQ99453 314 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 GPR22Q99680 433 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 BFARQ9NZS9 450 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 ACOT9Q9Y305 439 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 A0A0G2JMP0 313 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 PNMA8CA0A1B0GUJ8 204 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 METTL15A6NJ78 407 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 KATNA1O75449 491 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 LRIG2O94898 1065 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 SNX4O95219 450 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 IL7P13232 177 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 STMN1P16949 149 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 PRIM2P49643 509 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 KPNA2P52292 529 aaKnown RBP11.95□□□□□ -0.5
C9orf3-203ENST00000375315 FAM189BP81408 668 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 PLEKHG6Q3KR16 790 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 VPS26BQ4G0F5 336 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 SYT6Q5T7P8 510 aaPredicted RBP11.95□□□□□ -0.5
C9orf3-203ENST00000375315 ZNF517Q6ZMY9 492 aaPredicted RBP11.95□□□□□ -0.5
C9orf3-203ENST00000375315 KCNMB4Q86W47 210 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 RAB43Q86YS6 212 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 MICU2Q8IYU8 434 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 SLC22A15Q8IZD6 547 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 AMER2Q8N7J2 671 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 ACVR1CQ8NER5 493 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 CELF6Q96J87 481 aaKnown RBP11.95□□□□□ -0.5
C9orf3-203ENST00000375315 OMDQ99983 421 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 COLEC11Q9BWP8 271 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 TRIM54Q9BYV2 358 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 NMUR1Q9HB89 426 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 IARS2Q9NSE4 1012 aaKnown RBP11.95□□□□□ -0.5
C9orf3-203ENST00000375315 VPS4AQ9UN37 437 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 A3GALT2U3KPV4 340 aa11.95□□□□□ -0.5
C9orf3-203ENST00000375315 TDRD15B5MCY1 1934 aaKnown RBP11.94□□□□□ -0.5
C9orf3-203ENST00000375315 A0A1W2PQH9 124 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 HMX3A6NHT5 357 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 FXYD1O00168 92 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 PITPNM1O00562 1244 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 PRKACAP17612 351 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 GPX3P22352 226 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 ATP5F1P24539 256 aaPredicted RBP11.94□□□□□ -0.5
C9orf3-203ENST00000375315 ACVR2AP27037 513 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 POLD2P49005 469 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 DNAJB13P59910 316 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 CLCA4Q14CN2 919 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 PXDC1Q5TGL8 231 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 SDE2Q6IQ49 451 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 FBXO46Q6PJ61 603 aaPredicted RBP11.94□□□□□ -0.5
C9orf3-203ENST00000375315 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.94□□□□□ -0.5
C9orf3-203ENST00000375315 SNAPC3Q92966 411 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 LGMNQ99538 433 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 TKTL2Q9H0I9 626 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 C11orf49Q9H6J7 331 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 MARCH5Q9NX47 278 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 MKLN1Q9UL63 735 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 TPRKBQ9Y3C4 175 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 A0A0X1KG70 313 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 ZNF487B1APH4 448 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 M0QZQ0 153 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 CNTN5O94779 1100 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 SLC4A1P02730 911 aa11.94□□□□□ -0.5
C9orf3-203ENST00000375315 AVPR1AP37288 418 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms