RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 C3orf18Q9UK00 162 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 PCDHB8Q9UN66 801 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 POLR3HQ9Y535 204 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-203ENST00000374877 FAM92AA1XBS5 289 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 B3GAT3O94766 335 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 NPPAP01160 153 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 BMP4P12644 408 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 ITIH1P19827 911 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 BRCC3P46736 316 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 PCYT1AP49585 367 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 HTR6P50406 440 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 MLLT6P55198 1093 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-203ENST00000374877 TPTEP56180 551 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 EMX1Q04741 257 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-203ENST00000374877 TOP3AQ13472 1001 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-203ENST00000374877 EIF4EBP2Q13542 120 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-203ENST00000374877 CARTPTQ16568 116 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 DGUOKQ16854 277 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 INAVAQ3KP66 663 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 ADPRMQ3LIE5 342 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 LAIR2Q6ISS4 152 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 Q6ZSR9 355 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 SLC7A5P1Q8MH63 180 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 ARRDC2Q8TBH0 407 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 METTL6Q8TCB7 284 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 MCOLN3Q8TDD5 553 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 ZNF583Q96ND8 569 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 FAM193BQ96PV7 902 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-203ENST00000374877 POPDC3Q9HBV1 291 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 VAPAQ9P0L0 249 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 VPS51Q9UID3 782 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 INVSQ9Y283 1065 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 COMMD10Q9Y6G5 202 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 ABHD14A-ACY1A0A1B0GW23 586 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 LCHNA4D1U4 455 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 NDUFS3O75489 264 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 PRKD3O94806 890 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 MYO1DO94832 1006 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 FTH1P02794 183 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 PABPC1P11940 636 aaKnown RBP10.9□□□□□ -0.66
CCDC40-203ENST00000374877 PSMB9P28065 219 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 MAP2K4P45985 399 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 FPGSQ05932 587 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 CYP20A1Q6UW02 462 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 UBE2Q1Q7Z7E8 422 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 SCN4BQ8IWT1 228 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 EID3Q8N140 333 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 DPP10Q8N608 796 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 ZNF641Q96N77 438 aaPredicted RBP10.9□□□□□ -0.66
CCDC40-203ENST00000374877 NMUR1Q9HB89 426 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 MAGEE1Q9HCI5 957 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 SARS2Q9NP81 518 aaKnown RBP10.9□□□□□ -0.66
CCDC40-203ENST00000374877 ORC6Q9Y5N6 252 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 DNAH12Q6ZR08 3092 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 A0A1W2PQH9 124 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 KATNA1O75449 491 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 PCMT1P22061 227 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 FMO3P31513 532 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 SERPINB10P48595 397 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 ISL1P61371 349 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 MTA1Q13330 715 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 KCNJ8Q15842 424 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 PTPRNQ16849 979 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 ARTNQ5T4W7 220 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 PLEKHG7Q6ZR37 379 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 GALNT5Q7Z7M9 940 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 LRRTM3Q86VH5 581 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 SLC22A16Q86VW1 577 aa10.9□□□□□ -0.66
CCDC40-203ENST00000374877 CIR1Q86X95 450 aaPredicted RBP10.9□□□□□ -0.66
CCDC40-203ENST00000374877 DNMT3BQ9UBC3 853 aaKnown RBP10.9□□□□□ -0.66
CCDC40-203ENST00000374877 A8MU76 341 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 SLC22A1O15245 554 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 GABARAPO95166 117 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 ANGPTL1O95841 491 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 CAPN1P07384 714 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 CYP4B1P13584 511 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 TGM1P22735 817 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 NRG1Q02297 640 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-203ENST00000374877 PWP1Q13610 501 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 AGAP7PQ5VUJ5 663 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 MSANTD2Q6P1R3 559 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 SCD5Q86SK9 330 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 ZNF280BQ86YH2 543 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 UMODL1-AS1Q8N2C9 162 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 OR10Q1Q8NGQ4 319 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 PSMA8Q8TAA3 256 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 FAR1Q8WVX9 515 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 STARD8Q92502 1023 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 VWCEQ96DN2 955 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 CDKN2AIPNLQ96HQ2 116 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 MCOLN1Q9GZU1 580 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 RMI1Q9H9A7 625 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 KIAA1522Q9P206 1035 aaPredicted RBP10.89□□□□□ -0.67
CCDC40-203ENST00000374877 ERVK-18Q9QC07 812 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 LOC285095A0A1B0GVY8 99 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 BCKDKO14874 412 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 OGNP20774 298 aaKnown RBP10.89□□□□□ -0.67
CCDC40-203ENST00000374877 ERVPABLB-1P60509 514 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 NCS1P62166 190 aa10.89□□□□□ -0.67
CCDC40-203ENST00000374877 ZNF235Q14590 738 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms