RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 CD207Q9UJ71 328 aa4.55□□□□□ -1.68
PMS1-202ENST00000374826 FBXL5Q9UKA1 691 aa4.55□□□□□ -1.68
PMS1-202ENST00000374826 FBXW11Q9UKB1 542 aa4.55□□□□□ -1.68
PMS1-202ENST00000374826 SNX9Q9Y5X1 595 aa4.55□□□□□ -1.68
PMS1-202ENST00000374826 DOCK9Q9BZ29 2069 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 ARHGEF37A1IGU5 675 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 SYCE3A1L190 88 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 FSD2A1L4K1 749 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 IFITM10A6NMD0 228 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 PRRG1O14668 218 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 HUS1O60921 280 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 RFPL2O75678 378 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 ACTL6BO94805 426 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 HEXIM1O94992 359 aaKnown RBP4.54□□□□□ -1.68
PMS1-202ENST00000374826 SEC24AO95486 1093 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 VNN2O95498 520 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 ASS1P00966 412 aaKnown RBP4.54□□□□□ -1.68
PMS1-202ENST00000374826 SETSIPP0DME0 302 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 IL9P15248 144 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 TYMPP19971 482 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 SP100P23497 879 aaPredicted RBP4.54□□□□□ -1.68
PMS1-202ENST00000374826 MTIF2P46199 727 aaKnown RBP4.54□□□□□ -1.68
PMS1-202ENST00000374826 PCP4P48539 62 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 FMO5P49326 533 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 RASSF2P50749 326 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 RPS6KA2Q15349 733 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 SOWAHAQ2M3V2 549 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 KLHL40Q2TBA0 621 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 TBRG1Q3YBR2 411 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 CBWD6Q4V339 395 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 SLC39A12Q504Y0 691 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 ZNF667Q5HYK9 610 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 CBWD3Q5JTY5 395 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 CBWD5Q5RIA9 395 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 LIN9Q5TKA1 542 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 ANKRD54Q6NXT1 300 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 PDXDC1Q6P996 788 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 SLC30A9Q6PML9 568 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 KLHL17Q6TDP4 642 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 KIAA1324Q6UXG2 1013 aaKnown RBP4.54□□□□□ -1.68
PMS1-202ENST00000374826 C15orf39Q6ZRI6 1047 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 TOGARAM2Q6ZUX3 1019 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 SLC44A2Q8IWA5 706 aaPredicted RBP4.54□□□□□ -1.68
PMS1-202ENST00000374826 PDCL2Q8N4E4 241 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 TMEM217Q8N7C4 229 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 MLKLQ8NB16 471 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 STKLD1Q8NE28 680 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 FAM110DQ8TAY7 271 aaPredicted RBP4.54□□□□□ -1.68
PMS1-202ENST00000374826 SEMA4DQ92854 862 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 SLC35C1Q96A29 364 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 SYAP1Q96A49 352 aaPredicted RBP4.54□□□□□ -1.68
PMS1-202ENST00000374826 NPAS1Q99742 590 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 RTP3Q9BQQ7 232 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 MRPL45Q9BRJ2 306 aaKnown RBP4.54□□□□□ -1.68
PMS1-202ENST00000374826 BRD8Q9H0E9 1235 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 SDCBP2Q9H190 292 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 PLAC1Q9HBJ0 212 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 DDX43Q9NXZ2 648 aaKnown RBP4.54□□□□□ -1.68
PMS1-202ENST00000374826 HMGXB4Q9UGU5 601 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 ARMCX3Q9UH62 379 aaPredicted RBP4.54□□□□□ -1.68
PMS1-202ENST00000374826 SLC25A13Q9UJS0 675 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 NME7Q9Y5B8 376 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 CHD5Q8TDI0 1954 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 PI4KAP42356 2102 aa4.54□□□□□ -1.68
PMS1-202ENST00000374826 MTMR11A4FU01 709 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 OR6C75A6NL08 312 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 CCL16O15467 120 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 MBTPS2O43462 519 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 STX10O60499 249 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 ATP2C2O75185 946 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 CCDC192P0DO97 292 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 CD58P19256 250 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 PTMSP20962 102 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 LMO2P25791 158 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 ELF1P32519 619 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 GTF2H1P32780 548 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 AP3M2P53677 418 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 CDH8P55286 799 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 POLE2P56282 527 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 AP2B1P63010 937 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 NTHL1P78549 312 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 MRPS5P82675 430 aaKnown RBP4.53□□□□□ -1.68
PMS1-202ENST00000374826 TSPY1Q01534 308 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 ROR2Q01974 943 aaKnown RBP4.53□□□□□ -1.68
PMS1-202ENST00000374826 GALNT1Q10472 559 aaPredicted RBP4.53□□□□□ -1.68
PMS1-202ENST00000374826 LRMPQ12912 555 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 PPM1LQ5SGD2 360 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 SYCP2LQ5T4T6 812 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 KRT39Q6A163 491 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 ZNF324BQ6AW86 544 aaPredicted RBP4.53□□□□□ -1.68
PMS1-202ENST00000374826 CAPRIN2Q6IMN6 1127 aaKnown RBP4.53□□□□□ -1.68
PMS1-202ENST00000374826 SLC8B1Q6J4K2 584 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 AAGABQ6PD74 315 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 TMEM184AQ6ZMB5 413 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 SLC16A12Q6ZSM3 486 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 Q6ZTK2 550 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 GPR65Q8IYL9 337 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 THEM5Q8N1Q8 247 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 TMEM86AQ8N2M4 240 aa4.53□□□□□ -1.68
PMS1-202ENST00000374826 DPP10Q8N608 796 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 718.5 ms