RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 EPHB3P54753 998 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 EMX2Q04743 252 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 NOGQ13253 232 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 DDX39BQ13838 428 aaKnown RBP16.73■□□□□ 0.27
RXRB-201ENST00000374680 ATP13A5Q4VNC0 1218 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 PDCD4Q53EL6 469 aaKnown RBP16.73■□□□□ 0.27
RXRB-201ENST00000374680 RETSATQ6NUM9 610 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 SUSD1Q6UWL2 747 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 C10orf111Q8N326 155 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 ALG14Q96F25 216 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 EGLN2Q96KS0 407 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 MUS81Q96NY9 551 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 C2orf49Q9BVC5 232 aaPredicted RBP16.73■□□□□ 0.27
RXRB-201ENST00000374680 MTG2Q9H4K7 406 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 MAGEE1Q9HCI5 957 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 PFDN4Q9NQP4 134 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 INTS6Q9UL03 887 aaKnown RBP16.73■□□□□ 0.27
RXRB-201ENST00000374680 VPS4AQ9UN37 437 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 HOXA2O43364 376 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 GMNNO75496 209 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 VARSP26640 1264 aaKnown RBP16.73■□□□□ 0.27
RXRB-201ENST00000374680 ATP6AP1Q15904 470 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 LRRC66Q68CR7 880 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 GAREM2Q75VX8 874 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 ITIH5Q86UX2 942 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 STK40Q8N2I9 435 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 TMBIM1Q969X1 311 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 ITCHQ96J02 903 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 TMEM175Q9BSA9 504 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 BBS2Q9BXC9 721 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 POLR1BQ9H9Y6 1135 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 ZIM2Q9NZV7 527 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 ADGRE2Q9UHX3 823 aa16.73■□□□□ 0.27
RXRB-201ENST00000374680 DNAH14Q0VDD8 3507 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 ABLIM3O94929 683 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 MYCLP1P12525 358 aaPredicted RBP16.72■□□□□ 0.27
RXRB-201ENST00000374680 DEFB103AP81534 67 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 CTBSQ01459 385 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 TLE2Q04725 743 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 CRY1Q16526 586 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 ACBD5Q5T8D3 534 aaPredicted RBP16.72■□□□□ 0.27
RXRB-201ENST00000374680 SERPINA13PQ6UXR4 307 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 EFL1Q7Z2Z2 1120 aaKnown RBP16.72■□□□□ 0.27
RXRB-201ENST00000374680 SNX20Q7Z614 316 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 CRIPAKQ8N1N5 446 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 LMNTD1Q8N9Z9 388 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 SCAMP4Q969E2 229 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 DUS3LQ96G46 650 aaKnown RBP16.72■□□□□ 0.27
RXRB-201ENST00000374680 TSEN34Q9BSV6 310 aaKnown RBP16.72■□□□□ 0.27
RXRB-201ENST00000374680 HPS4Q9NQG7 708 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 SMPD3Q9NY59 655 aaPredicted RBP16.72■□□□□ 0.27
RXRB-201ENST00000374680 GNPTGQ9UJJ9 305 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 FRMPD3Q5JV73 1810 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 GLUD1P00367 558 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 GPIP06744 558 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 DGKAP23743 735 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 AKT1P31749 480 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 MTHFRP42898 656 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 RPIAP49247 311 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 CLCN2P51788 898 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 NKG7Q16617 165 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 INO80DQ53TQ3 878 aaPredicted RBP16.72■□□□□ 0.27
RXRB-201ENST00000374680 TMTC4Q5T4D3 741 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 VRK3Q8IV63 474 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 ZNF366Q8N895 744 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 OR2T12Q8NG77 320 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 OR52E6Q96RD3 313 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 COMMD8Q9NX08 183 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 AASSQ9UDR5 926 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 SLC8A2Q9UPR5 921 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 DLGAP4Q9Y2H0 992 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 TRIM17Q9Y577 477 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 TNPO3Q9Y5L0 923 aaKnown RBP16.72■□□□□ 0.27
RXRB-201ENST00000374680 INSL5Q9Y5Q6 135 aa16.72■□□□□ 0.27
RXRB-201ENST00000374680 TEX28O15482 410 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 TACR1P25103 407 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 PMS2P3Q13401 168 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 TSTA3Q13630 321 aaPredicted RBP16.71■□□□□ 0.27
RXRB-201ENST00000374680 C11orf91Q3C1V1 193 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 CYBRD1Q53TN4 286 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 GPR141Q7Z602 305 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 SLC13A3Q8WWT9 602 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 SORCS1Q8WY21 1168 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 RHBDF1Q96CC6 855 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 ZNF583Q96ND8 569 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 EBPLQ9BY08 206 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 CD244Q9BZW8 370 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 MRPL17Q9NRX2 175 aaKnown RBP16.71■□□□□ 0.27
RXRB-201ENST00000374680 PTBP2Q9UKA9 531 aaKnown RBP16.71■□□□□ 0.27
RXRB-201ENST00000374680 CCL26Q9Y258 94 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 RASAL1O95294 804 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 URODP06132 367 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 ENO2P09104 434 aaPredicted RBP16.71■□□□□ 0.27
RXRB-201ENST00000374680 EPB42P16452 691 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 ACRV1P26436 265 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 TPD52P55327 224 aaPredicted RBP16.71■□□□□ 0.27
RXRB-201ENST00000374680 CHRNB3Q05901 458 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 DEFB115Q30KQ5 88 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 SLC36A3Q495N2 470 aa16.71■□□□□ 0.27
RXRB-201ENST00000374680 AASDHQ4L235 1098 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms