RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 RP1P56715 2156 aa14.66□□□□□ -0.06
HSPG2-201ENST00000374673 COL27A1Q8IZC6 1860 aaPredicted RBP14.65□□□□□ -0.06
HSPG2-201ENST00000374673 CEP250Q9BV73 2442 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 LILRA5A6NI73 299 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 FAM155BO75949 473 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 FTH1P19P0C7X4 201 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 CDK4P11802 303 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 ENO3P13929 434 aaPredicted RBP14.65□□□□□ -0.06
HSPG2-201ENST00000374673 ID4P47928 161 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 SIM1P81133 766 aaPredicted RBP14.65□□□□□ -0.06
HSPG2-201ENST00000374673 POU4F1Q01851 419 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 PDAP1Q13442 181 aaKnown RBP14.65□□□□□ -0.06
HSPG2-201ENST00000374673 ACSBG2Q5FVE4 666 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 LRRC8EQ6NSJ5 796 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 DUS1LQ6P1R4 473 aaKnown RBP14.65□□□□□ -0.06
HSPG2-201ENST00000374673 UNC5DQ6UXZ4 953 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 TMEM26Q6ZUK4 368 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 SLCO6A1Q86UG4 719 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 PIM3Q86V86 326 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 ACVR1CQ8NER5 493 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 UHMK1Q8TAS1 419 aaKnown RBP14.65□□□□□ -0.06
HSPG2-201ENST00000374673 PAFAH2Q99487 392 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 SLC38A3Q99624 504 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 CCDC3Q9BQI4 270 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 MVB12BQ9H7P6 319 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 POPDC3Q9HBV1 291 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 APOBEC2Q9Y235 224 aaKnown RBP14.65□□□□□ -0.06
HSPG2-201ENST00000374673 MTO1Q9Y2Z2 717 aaKnown RBP14.65□□□□□ -0.06
HSPG2-201ENST00000374673 COLEC10Q9Y6Z7 277 aa14.65□□□□□ -0.06
HSPG2-201ENST00000374673 ASXL3Q9C0F0 2248 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 PRAMEF33A0A0G2JMD5 474 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 EXOC1LA0A1B0GW35 172 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 ZW10O43264 779 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 MATN4O95460 622 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 INHBAP08476 426 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 ITGA2BP08514 1039 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 MPC1LP0DKB6 136 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 EPHA4P54764 986 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 TAS2R39P59534 338 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 E2F1Q01094 437 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 UAP1Q16222 522 aaPredicted RBP14.64□□□□□ -0.07
HSPG2-201ENST00000374673 PAQR3Q6TCH7 311 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 SPRED1Q7Z699 444 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 CPNE9Q8IYJ1 553 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 TBC1D21Q8IYX1 336 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 OR5K2Q8NHB8 316 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 UBLCP1Q8WVY7 318 aaPredicted RBP14.64□□□□□ -0.07
HSPG2-201ENST00000374673 FERD3LQ96RJ6 166 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 KIR3DX1Q9H7L2 352 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 FETUBQ9UGM5 382 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 ZNF180Q9UJW8 692 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 ASF1AQ9Y294 204 aa14.64□□□□□ -0.07
HSPG2-201ENST00000374673 RPN2P04844 631 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 ZNF37AP17032 561 aaPredicted RBP14.63□□□□□ -0.07
HSPG2-201ENST00000374673 MSH2P43246 934 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 MAPK9P45984 424 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 RGS4P49798 205 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 SERPINB9P50453 376 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 SLC12A2P55011 1212 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 GPLD1P80108 840 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 ABRQ12979 859 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 GPR18Q14330 331 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 KRT33BQ14525 404 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 USP10Q14694 798 aaKnown RBP14.63□□□□□ -0.07
HSPG2-201ENST00000374673 ZKSCAN8Q15776 578 aaPredicted RBP14.63□□□□□ -0.07
HSPG2-201ENST00000374673 MAP9Q49MG5 647 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 CYHR1Q6ZMK1 362 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 ZNF761Q86XN6 746 aaPredicted RBP14.63□□□□□ -0.07
HSPG2-201ENST00000374673 MREGQ8N565 214 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 WDR48Q8TAF3 677 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 DCAKDQ8WVC6 231 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 MRRFQ96E11 262 aaKnown RBP14.63□□□□□ -0.07
HSPG2-201ENST00000374673 TSPAN17Q96FV3 270 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 FOPNLQ96NB1 174 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 DHRS4Q9BTZ2 278 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 TRIT1Q9H3H1 467 aaKnown RBP14.63□□□□□ -0.07
HSPG2-201ENST00000374673 EPB41L1Q9H4G0 881 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 SYTL2Q9HCH5 934 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 KCNK4Q9NYG8 393 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 POLG2Q9UHN1 485 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 SLC24A2Q9UI40 661 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 SLC39A10Q9ULF5 831 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 IKBKGQ9Y6K9 419 aa14.63□□□□□ -0.07
HSPG2-201ENST00000374673 DMXL1Q9Y485 3027 aa14.62□□□□□ -0.07
HSPG2-201ENST00000374673 IGHV1OR21-1A0A087WYE8 117 aa14.62□□□□□ -0.07
HSPG2-201ENST00000374673 A0A1W2PQM1 296 aa14.62□□□□□ -0.07
HSPG2-201ENST00000374673 HMX2A2RU54 273 aa14.62□□□□□ -0.07
HSPG2-201ENST00000374673 POC1B-GALNT4F8VUJ3 575 aa14.62□□□□□ -0.07
HSPG2-201ENST00000374673 NTN3O00634 580 aaPredicted RBP14.62□□□□□ -0.07
HSPG2-201ENST00000374673 B4GAT1O43505 415 aa14.62□□□□□ -0.07
HSPG2-201ENST00000374673 PSIP1O75475 530 aaKnown RBP14.62□□□□□ -0.07
HSPG2-201ENST00000374673 WISP3O95389 354 aaPredicted RBP14.62□□□□□ -0.07
HSPG2-201ENST00000374673 TSPAN12O95859 305 aa14.62□□□□□ -0.07
HSPG2-201ENST00000374673 STMN1P16949 149 aa14.62□□□□□ -0.07
HSPG2-201ENST00000374673 SAT1P21673 171 aa14.62□□□□□ -0.07
HSPG2-201ENST00000374673 CNTFP26441 200 aa14.62□□□□□ -0.07
HSPG2-201ENST00000374673 GCAP28676 217 aa14.62□□□□□ -0.07
HSPG2-201ENST00000374673 ALDH4A1P30038 563 aa14.62□□□□□ -0.07
HSPG2-201ENST00000374673 HSD17B3P37058 310 aa14.62□□□□□ -0.07
HSPG2-201ENST00000374673 PGGT1BP53609 377 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms