RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 NEDD8-MDP1E9PL57 170 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 OR7A17O14581 309 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 DENRO43583 198 aaKnown RBP11.86□□□□□ -0.51
HMGCL-202ENST00000374487 POP4O95707 220 aaKnown RBP11.86□□□□□ -0.51
HMGCL-202ENST00000374487 PFKLP17858 780 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 SLC6A2P23975 617 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 CHN2P52757 468 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 BNIP2Q12982 314 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 TLR1Q15399 786 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 NR6A1Q15406 480 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 FUT11Q495W5 492 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 PDCD4Q53EL6 469 aaKnown RBP11.86□□□□□ -0.51
HMGCL-202ENST00000374487 FAM78AQ5JUQ0 283 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 TANGO2Q6ICL3 276 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 Q6ZSR9 355 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 TMEM25Q86YD3 366 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 TICAM1Q8IUC6 712 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 RSPRY1Q96DX4 576 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 LYSMD1Q96S90 227 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 COPS8Q99627 209 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 TRIM54Q9BYV2 358 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 ZIM2Q9NZV7 527 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 GMPR2Q9P2T1 348 aaKnown RBP11.86□□□□□ -0.51
HMGCL-202ENST00000374487 OPTCQ9UBM4 332 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 EGFL7Q9UHF1 273 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 LEF1Q9UJU2 399 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-202ENST00000374487 FAM234BA2RU67 622 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 ZNF839A8K0R7 811 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 FXYD1O00168 92 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 AKAP10O43572 662 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 KIF1CO43896 1103 aaKnown RBP11.86□□□□□ -0.51
HMGCL-202ENST00000374487 HSD17B1P14061 328 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 GDF5P43026 501 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 MRPL19P49406 292 aaKnown RBP11.86□□□□□ -0.51
HMGCL-202ENST00000374487 CCNHP51946 323 aaPredicted RBP11.86□□□□□ -0.51
HMGCL-202ENST00000374487 PRKG2Q13237 762 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 TIGD2Q4W5G0 525 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 CARD16Q5EG05 197 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 SULT1C3Q6IMI6 304 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 DPY19L3Q6ZPD9 716 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 ZUFSPQ96AP4 578 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 SLCO4A1Q96BD0 722 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 DUS3LQ96G46 650 aaKnown RBP11.86□□□□□ -0.51
HMGCL-202ENST00000374487 LRRC3BQ96PB8 259 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 BBS2Q9BXC9 721 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 CD244Q9BZW8 370 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 ABCG8Q9H221 673 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 SLC52A3Q9NQ40 469 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 CMTM6Q9NX76 183 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 ELOVL2Q9NXB9 296 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 AP4B1Q9Y6B7 739 aa11.86□□□□□ -0.51
HMGCL-202ENST00000374487 CXorf51AA0A1B0GTR3 108 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 TAPBPO15533 448 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 EEDO75530 441 aaKnown RBP11.85□□□□□ -0.51
HMGCL-202ENST00000374487 PDGFBP01127 241 aaPredicted RBP11.85□□□□□ -0.51
HMGCL-202ENST00000374487 UGT2B4P06133 528 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 HTR6P50406 440 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 EPHA5P54756 1037 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 PTSQ03393 145 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 EMX2Q04743 252 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 HTR4Q13639 388 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 INPP5AQ14642 412 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 ABRAXAS2Q15018 415 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 NRF1Q16656 503 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 PHKG1Q16816 387 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 AP5B1Q2VPB7 878 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 SPATS1Q496A3 300 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 AMIGO2Q86SJ2 522 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 IFNEQ86WN2 208 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 SPPL2CQ8IUH8 684 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 ADGRG2Q8IZP9 1017 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 SFRP1Q8N474 314 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 SLC44A3Q8N4M1 653 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 MARVELD2Q8N4S9 558 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 PROKR1Q8TCW9 393 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 CANT1Q8WVQ1 401 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 ECHDC3Q96DC8 303 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 LMLNQ96KR4 655 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 CNBD2Q96M20 576 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 ZNF641Q96N77 438 aaPredicted RBP11.85□□□□□ -0.51
HMGCL-202ENST00000374487 CPEB1Q9BZB8 566 aaKnown RBP11.85□□□□□ -0.51
HMGCL-202ENST00000374487 KCTD5Q9NXV2 234 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 ZDHHC3Q9NYG2 299 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 SLCO3A1Q9UIG8 710 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 CNOT11Q9UKZ1 510 aaKnown RBP11.85□□□□□ -0.51
HMGCL-202ENST00000374487 AURKCQ9UQB9 309 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 NCOR1O75376 2440 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 C15orf38-AP3S2A0A0A6YYH1 394 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 CAPNS1P04632 268 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 POU2F2P09086 479 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 ATP6V1B2P21281 511 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 FCARP24071 287 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 PSMA4P25789 261 aaKnown RBP11.85□□□□□ -0.51
HMGCL-202ENST00000374487 RECQLP46063 649 aaPredicted RBP11.85□□□□□ -0.51
HMGCL-202ENST00000374487 POLR2LP62875 67 aaKnown RBP11.85□□□□□ -0.51
HMGCL-202ENST00000374487 TRAF3Q13114 568 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 ARHGEF7Q14155 803 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 CRY1Q16526 586 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 ATP13A5Q4VNC0 1218 aa11.85□□□□□ -0.51
HMGCL-202ENST00000374487 RABL3Q5HYI8 236 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms