RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 DHX9Q08211 1270 aaKnown RBP11.8□□□□□ -0.52
HDAC8-204ENST00000373560 DMPKQ09013 629 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 TUBB8Q3ZCM7 444 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 NKAIN1Q4KMZ8 207 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 ZNF569Q5MCW4 686 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 IRAK1BP1Q5VVH5 260 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 ERICH6BQ5W0A0 696 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 KLHL10Q6JEL2 608 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 KLHL35Q6PF15 583 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 FGD2Q7Z6J4 655 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 SIRT6Q8N6T7 355 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 GPR26Q8NDV2 337 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 OR11G2Q8NGC1 345 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 SLC30A5Q8TAD4 765 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 SLC20A1Q8WUM9 679 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 ZNF592Q92610 1267 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 DEF6Q9H4E7 631 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 IMP3Q9NV31 184 aaKnown RBP11.8□□□□□ -0.52
HDAC8-204ENST00000373560 PGPEP1Q9NXJ5 209 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 KCNN3Q9UGI6 736 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 DNAJC12Q9UKB3 198 aa11.8□□□□□ -0.52
HDAC8-204ENST00000373560 C1orf232A0A0U1RR37 186 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 RNF212BA8MTL3 300 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 FAM227AF5H4B4 570 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 EEF2KO00418 725 aaKnown RBP11.79□□□□□ -0.52
HDAC8-204ENST00000373560 CTAG2O75638 210 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 SNRNP200O75643 2136 aaKnown RBP11.79□□□□□ -0.52
HDAC8-204ENST00000373560 TOXO94900 526 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 CRYABP02511 175 aaKnown RBP11.79□□□□□ -0.52
HDAC8-204ENST00000373560 MSL3P1P0C860 447 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 MTHFD1P11586 935 aaKnown RBP11.79□□□□□ -0.52
HDAC8-204ENST00000373560 GPD1P21695 349 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 DNASE1P24855 282 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 PON1P27169 355 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 GABRA4P48169 554 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 YBX1P67809 324 aaKnown RBP11.79□□□□□ -0.52
HDAC8-204ENST00000373560 DCDP81605 110 aaKnown RBP11.79□□□□□ -0.52
HDAC8-204ENST00000373560 PTP4A2Q12974 167 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 RHBDD2Q6NTF9 364 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 DPY19L2P1Q6NXN4 242 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 WDR59Q6PJI9 974 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 COX15Q7KZN9 410 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 DOLPP1Q86YN1 238 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 LPCAT1Q8NF37 534 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 BRIX1Q8TDN6 353 aaKnown RBP11.79□□□□□ -0.52
HDAC8-204ENST00000373560 PHF10Q8WUB8 498 aaKnown RBP11.79□□□□□ -0.52
HDAC8-204ENST00000373560 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.79□□□□□ -0.52
HDAC8-204ENST00000373560 GPR137Q96N19 417 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 PWWP2AQ96N64 755 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 SPATA16Q9BXB7 569 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 POLDIP3Q9BY77 421 aaKnown RBP11.79□□□□□ -0.52
HDAC8-204ENST00000373560 SOX17Q9H6I2 414 aaPredicted RBP11.79□□□□□ -0.52
HDAC8-204ENST00000373560 ZNF160Q9HCG1 818 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 SLC24A2Q9UI40 661 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 SERTAD3Q9UJW9 196 aa11.79□□□□□ -0.52
HDAC8-204ENST00000373560 LSM8O95777 96 aaKnown RBP11.78□□□□□ -0.52
HDAC8-204ENST00000373560 WDPCPO95876 746 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 MMP8P22894 467 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 HOXC12P31275 282 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 HALP42357 657 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 DGKQP52824 942 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 EPHB1P54762 984 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 KRT85P78386 507 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 SNTB1Q13884 538 aaKnown RBP11.78□□□□□ -0.52
HDAC8-204ENST00000373560 NFE2L1Q14494 772 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 ZIC1Q15915 447 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 CES4AQ5XG92 561 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 TRIM73Q86UV7 250 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 TRAPPC5Q8IUR0 188 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 CARFQ8N187 725 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 DTWD1Q8N5C7 304 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 ZNF655Q8N720 491 aaPredicted RBP11.78□□□□□ -0.52
HDAC8-204ENST00000373560 NAT14Q8WUY8 206 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 CPLX3Q8WVH0 158 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 GLYATL1Q969I3 302 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 ZNF599Q96NL3 588 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 PEBP4Q96S96 227 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 INSM2Q96T92 566 aaPredicted RBP11.78□□□□□ -0.52
HDAC8-204ENST00000373560 C17orf62Q9BQA9 187 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.78□□□□□ -0.52
HDAC8-204ENST00000373560 ZNF395Q9H8N7 513 aaPredicted RBP11.78□□□□□ -0.52
HDAC8-204ENST00000373560 NT5MQ9NPB1 228 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 GMPR2Q9P2T1 348 aaKnown RBP11.78□□□□□ -0.52
HDAC8-204ENST00000373560 PPT2Q9UMR5 302 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 AP4E1Q9UPM8 1137 aa11.78□□□□□ -0.52
HDAC8-204ENST00000373560 DYTNA2CJ06 578 aa11.77□□□□□ -0.53
HDAC8-204ENST00000373560 GSAPA4D1B5 854 aa11.77□□□□□ -0.53
HDAC8-204ENST00000373560 FOXO6A8MYZ6 492 aa11.77□□□□□ -0.53
HDAC8-204ENST00000373560 BTN3A3O00478 584 aa11.77□□□□□ -0.53
HDAC8-204ENST00000373560 HOXD4P09016 255 aaPredicted RBP11.77□□□□□ -0.53
HDAC8-204ENST00000373560 HBQ1P09105 142 aa11.77□□□□□ -0.53
HDAC8-204ENST00000373560 ZSCAN22P10073 491 aaPredicted RBP11.77□□□□□ -0.53
HDAC8-204ENST00000373560 HLA-DPA1P20036 260 aa11.77□□□□□ -0.53
HDAC8-204ENST00000373560 HSPA9P38646 679 aaKnown RBP11.77□□□□□ -0.53
HDAC8-204ENST00000373560 ST13P50502 369 aaKnown RBP11.77□□□□□ -0.53
HDAC8-204ENST00000373560 CTSCP53634 463 aa11.77□□□□□ -0.53
HDAC8-204ENST00000373560 OGDHQ02218 1023 aa11.77□□□□□ -0.53
HDAC8-204ENST00000373560 DSC2Q02487 901 aa11.77□□□□□ -0.53
HDAC8-204ENST00000373560 CACNG1Q06432 222 aa11.77□□□□□ -0.53
HDAC8-204ENST00000373560 FAM182AQ5T1J6 154 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms