RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 GALPQ9UBC7 116 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 PIKFYVEQ9Y2I7 2098 aa15.18■□□□□ 0.02
PRPF38B-202ENST00000370022 TRBV23OR9-2A0A075B6M9 112 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 CPED1A4D0V7 1026 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 ERLIN1O75477 346 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 RPN2P04844 631 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 HSD17B3P37058 310 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 ACADVLP49748 655 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 NOVA1P51513 510 aaKnown RBP15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 TIAL1Q01085 375 aaKnown RBP eCLIP15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 KRT33BQ14525 404 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 UAP1Q16222 522 aaPredicted RBP15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 GUSBP11Q6P575 273 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 UNC5DQ6UXZ4 953 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 MREGQ8N565 214 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 UHMK1Q8TAS1 419 aaKnown RBP15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 IFI44Q8TCB0 444 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 FOPNLQ96NB1 174 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 OLFM1Q99784 485 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 MVB12BQ9H7P6 319 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 SYTL2Q9HCH5 934 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 SLC40A1Q9NP59 571 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 MTO1Q9Y2Z2 717 aaKnown RBP15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 RNF215Q9Y6U7 377 aa15.17■□□□□ 0.02
PRPF38B-202ENST00000370022 CCDC151A5D8V7 595 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 POC1B-GALNT4F8VUJ3 575 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 PPM1DO15297 605 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 CTIFO43310 598 aaKnown RBP15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 FAM155BO75949 473 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 KRT38O76015 456 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 KCNK5O95279 499 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 MPC1LP0DKB6 136 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 STMN1P16949 149 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 EPHA4P54764 986 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 TAS2R39P59534 338 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 IL2P60568 153 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 DNAJC3Q13217 504 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 PUM1Q14671 1186 aaKnown RBP eCLIP15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 USP10Q14694 798 aaKnown RBP15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 ACSBG2Q5FVE4 666 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 LGSNQ5TDP6 509 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 EFL1Q7Z2Z2 1120 aaKnown RBP15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 VRK3Q8IV63 474 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 TBC1D21Q8IYX1 336 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 SKA2Q8WVK7 121 aaPredicted RBP15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 MRRFQ96E11 262 aaKnown RBP15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 SLC38A3Q99624 504 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 SLC30A3Q99726 388 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 DHRS4Q9BTZ2 278 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 TRIT1Q9H3H1 467 aaKnown RBP15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 POLG2Q9UHN1 485 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 SLC24A2Q9UI40 661 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 SLC39A10Q9ULF5 831 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 ASF1AQ9Y294 204 aa15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 ARID1BQ8NFD5 2236 aaPredicted RBP15.16■□□□□ 0.02
PRPF38B-202ENST00000370022 LILRA5A6NI73 299 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 KDM1AO60341 852 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 RFPL3O75679 317 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 MATN4O95460 622 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 NUDT17P0C025 328 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 MYF5P13349 255 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 SAT1P21673 171 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 E2F1Q01094 437 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 ZKSCAN8Q15776 578 aaPredicted RBP15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 PAQR3Q6TCH7 311 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 TMEM26Q6ZUK4 368 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 CCDC91Q7Z6B0 441 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 PIM3Q86V86 326 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 CPNE9Q8IYJ1 553 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 NKAPQ8N5F7 415 aaKnown RBP15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 ACVR1CQ8NER5 493 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 MYRIPQ8NFW9 859 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 OR5K2Q8NHB8 316 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 WDR48Q8TAF3 677 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 MAGEC3Q8TD91 643 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 CCDC74AQ96AQ1 378 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 FERD3LQ96RJ6 166 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 EPB41L1Q9H4G0 881 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 KIR3DX1Q9H7L2 352 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 APOBEC2Q9Y235 224 aaKnown RBP15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 CFAP20Q9Y6A4 193 aaKnown RBP15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 KRT37O76014 449 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 ZNF37AP17032 561 aaPredicted RBP15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 CRABP2P29373 138 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 CCNFP41002 786 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 RAB10P61026 200 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 GPLD1P80108 840 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 SIM1P81133 766 aaPredicted RBP15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 TTC23LQ6PF05 361 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 ADGRD1Q6QNK2 874 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 MYO1HQ8N1T3 1032 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 DCAKDQ8WVC6 231 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 PDLIM5Q96HC4 596 aaKnown RBP15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 CCDC3Q9BQI4 270 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 GPAMQ9HCL2 828 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 TOR4AQ9NXH8 423 aa15.15■□□□□ 0.02
PRPF38B-202ENST00000370022 ARHGEF17Q96PE2 2063 aaPredicted RBP15.14■□□□□ 0.01
PRPF38B-202ENST00000370022 TCEA3O75764 348 aa15.14■□□□□ 0.01
PRPF38B-202ENST00000370022 DKK1O94907 266 aa15.14■□□□□ 0.01
PRPF38B-202ENST00000370022 ABRQ12979 859 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms