RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CPZQ66K79 652 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 LCN10Q6JVE6 187 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 LCN9Q8WX39 176 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 FERD3LQ96RJ6 166 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 TLR10Q9BXR5 811 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 PITPNM3Q9BZ71 974 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 SRMSQ9H3Y6 488 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 TFB2MQ9H5Q4 396 aaKnown RBP15.56■□□□□ 0.08
CKS1B-202ENST00000368436 FANCEQ9HB96 536 aa15.56■□□□□ 0.08
CKS1B-202ENST00000368436 ARGFXA6NJG6 315 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 BTN3A3O00478 584 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 BTN3A1O00481 513 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 CCL22O00626 93 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 ZNF189O75820 626 aaPredicted RBP15.55■□□□□ 0.08
CKS1B-202ENST00000368436 TJP3O95049 919 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 CAPN1P07384 714 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 GP1BBP13224 206 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 MC4RP32245 332 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 CDKN1CP49918 316 aaPredicted RBP15.55■□□□□ 0.08
CKS1B-202ENST00000368436 PGDP52209 483 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 RWDD2BP57060 319 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 SPARCL1Q14515 664 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 KCTD11Q693B1 232 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 OR1L3Q8NH93 324 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 DNAJC1Q96KC8 554 aaKnown RBP15.55■□□□□ 0.08
CKS1B-202ENST00000368436 FAM118BQ9BPY3 351 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 SLC25A23Q9BV35 468 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 NLNQ9BYT8 704 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 TRIM5Q9C035 493 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 ING2Q9H160 280 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 ACSS2Q9NR19 701 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 PCMTD2Q9NV79 361 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 EPN1Q9Y6I3 576 aaPredicted RBP15.55■□□□□ 0.08
CKS1B-202ENST00000368436 DUSP10Q9Y6W6 482 aa15.55■□□□□ 0.08
CKS1B-202ENST00000368436 MACROD2A1Z1Q3 448 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 GSAPA4D1B5 854 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 BTNL10A8MVZ5 291 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 DDX3YO15523 660 aaKnown RBP15.54■□□□□ 0.08
CKS1B-202ENST00000368436 CEACAM4O75871 244 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 GSTM1P09488 218 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 ST6GAL1P15907 406 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 ACRV1P26436 265 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 PDHA2P29803 388 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 PREPP48147 710 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 CCL11P51671 97 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 GSTM4Q03013 218 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 CHAF1BQ13112 559 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 RPA4Q13156 261 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 AADACL2Q6P093 401 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 SERPINA9Q86WD7 417 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 ENDOVQ8N8Q3 282 aaKnown RBP15.54■□□□□ 0.08
CKS1B-202ENST00000368436 PHC3Q8NDX5 983 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 OR52E1Q8NGJ3 308 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 ALG3Q92685 438 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 LRRC45Q96CN5 670 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 CLIP3Q96DZ5 547 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 PSMG3-AS1Q96PY0 264 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 TRAPPC9Q96Q05 1148 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 NRTNQ99748 197 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 MVB12BQ9H7P6 319 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 VPS37BQ9H9H4 285 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 NLE1Q9NVX2 485 aaPredicted RBP15.54■□□□□ 0.08
CKS1B-202ENST00000368436 TCFL5Q9UL49 500 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 SNX7Q9UNH6 387 aa15.54■□□□□ 0.08
CKS1B-202ENST00000368436 TMEM150CB9EJG8 249 aa15.53■□□□□ 0.08
CKS1B-202ENST00000368436 IFRD1O00458 451 aaPredicted RBP15.53■□□□□ 0.08
CKS1B-202ENST00000368436 PRSS56P0CW18 603 aa15.53■□□□□ 0.08
CKS1B-202ENST00000368436 PSMA3P25788 255 aa15.53■□□□□ 0.08
CKS1B-202ENST00000368436 CETN2P41208 172 aa15.53■□□□□ 0.08
CKS1B-202ENST00000368436 PTGIRP43119 386 aa15.53■□□□□ 0.08
CKS1B-202ENST00000368436 BOP1Q14137 746 aaKnown RBP15.53■□□□□ 0.08
CKS1B-202ENST00000368436 PARP6Q2NL67 630 aa15.53■□□□□ 0.08
CKS1B-202ENST00000368436 MICALCLQ6ZW33 695 aa15.53■□□□□ 0.08
CKS1B-202ENST00000368436 AMIGO1Q86WK6 493 aa15.53■□□□□ 0.08
CKS1B-202ENST00000368436 ADGRF3Q8IZF5 1079 aa15.53■□□□□ 0.08
CKS1B-202ENST00000368436 TFGQ92734 400 aaPredicted RBP15.53■□□□□ 0.08
CKS1B-202ENST00000368436 CDKN2AIPNLQ96HQ2 116 aa15.53■□□□□ 0.08
CKS1B-202ENST00000368436 PANX2Q96RD6 677 aa15.53■□□□□ 0.08
CKS1B-202ENST00000368436 ACTR5Q9H9F9 607 aaPredicted RBP15.53■□□□□ 0.08
CKS1B-202ENST00000368436 SERTAD3Q9UJW9 196 aa15.53■□□□□ 0.08
CKS1B-202ENST00000368436 REXO2Q9Y3B8 237 aaKnown RBP15.53■□□□□ 0.08
CKS1B-202ENST00000368436 PCDHGB7Q9Y5F8 929 aa15.53■□□□□ 0.08
CKS1B-202ENST00000368436 SEC16AO15027 2179 aa15.53■□□□□ 0.08
CKS1B-202ENST00000368436 PCSK5Q92824 1860 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 SHANK1Q9Y566 2161 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 FER1L5A0AVI2 2057 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 SOWAHDA6NJG2 315 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 TTLL8A6PVC2 850 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 C2orf74A8MZ97 194 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 MAP3K7O43318 606 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 TMEM63AO94886 807 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 METTL18O95568 372 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 CYP2A7P20853 494 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 NADK2Q4G0N4 442 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 ZRANB3Q5FWF4 1079 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 ZNF449Q6P9G9 518 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 FAM198BQ6UWH4 519 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 PIANPQ8IYJ0 282 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 SYTL1Q8IYJ3 562 aa15.52■□□□□ 0.08
CKS1B-202ENST00000368436 CLDN19Q8N6F1 224 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms