RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 TTC4O95801 387 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 FGF3P11487 239 aaPredicted RBP21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 NDUFS1P28331 727 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 MLLT3P42568 568 aaPredicted RBP21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 SLC1A2P43004 574 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 PLOD1Q02809 727 aaPredicted RBP21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 HSPA14Q0VDF9 509 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 CBLBQ13191 982 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 THOC5Q13769 683 aaKnown RBP21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 PLCL1Q15111 1095 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 SYTL3Q4VX76 610 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 HSP90AA5PQ58FG0 334 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 SLC22A15Q8IZD6 547 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 ACVR1CQ8NER5 493 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 ZNF592Q92610 1267 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 C9orf72Q96LT7 481 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 TGM7Q96PF1 710 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 PANX3Q96QZ0 392 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 NAT9Q9BTE0 207 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 TSSK1BQ9BXA7 367 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 MVB12BQ9H7P6 319 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 WHRNQ9P202 907 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 CHMP2BQ9UQN3 213 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 ZZEF1O43149 2961 aa21.85■■□□□ 1.09
ECHDC1-203ENST00000368291 SDK2Q58EX2 2172 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 E7ESA3 106 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 NIPSNAP2O75323 286 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 SLCO2B1O94956 709 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 JMJD7P0C870 316 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 RBMS1P29558 406 aaKnown RBP21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 ARL4CP56559 192 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 CKAP4Q07065 602 aaKnown RBP21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 SPANXN3Q5MJ09 141 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 KCNMB4Q86W47 210 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 LMNTD2Q8IXW0 634 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 AGBL5Q8NDL9 886 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 OR5AR1Q8NGP9 310 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 ASZ1Q8WWH4 475 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 LRRC39Q96DD0 335 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 FBXO6Q9NRD1 293 aaPredicted RBP21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 THSD1Q9NS62 852 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 OCIAD1Q9NX40 245 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 GALPQ9UBC7 116 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 MRFAP1Q9Y605 127 aa21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 KMT2BQ9UMN6 2715 aaPredicted RBP21.84■■□□□ 1.09
ECHDC1-203ENST00000368291 ANKRD11Q6UB99 2663 aaPredicted RBP21.83■■□□□ 1.09
ECHDC1-203ENST00000368291 PFDN6O15212 129 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 KIF1CO43896 1103 aaKnown RBP21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 ESR1P03372 595 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 TUBB4AP04350 444 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 ANKRD34CP0C6C1 535 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 ERVK-10P10266 1014 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 CSTF2P33240 577 aaKnown RBP eCLIP21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 PRKG2Q13237 762 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 KRT33BQ14525 404 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 FASTKD3Q14CZ7 662 aaKnown RBP21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 WHAMMP3Q1A5X7 153 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 STEAP4Q687X5 459 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 ZNF549Q6P9A3 640 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 UNC5AQ6ZN44 842 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 BMPERQ8N8U9 685 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 OR52E1Q8NGJ3 308 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 CALML6Q8TD86 181 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 IARS2Q9NSE4 1012 aaKnown RBP21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 FBXO5Q9UKT4 447 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 ASF1AQ9Y294 204 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 MED16Q9Y2X0 877 aa21.83■■□□□ 1.08
ECHDC1-203ENST00000368291 ZFHX4Q86UP3 3567 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 OR5K3A6NET4 321 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 APOA4P06727 396 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 TPBGLP0DKB5 382 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 PKMP14618 531 aaKnown RBP21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 SLC5A2P31639 672 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 EIF2S3P41091 472 aaKnown RBP21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 MAPK10P53779 464 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 MPP1Q00013 466 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 GBX1Q14549 363 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 TRADDQ15628 312 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 IRGCQ6NXR0 463 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 TBC1D21Q8IYX1 336 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 BBOF1Q8ND07 529 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 OR4E2Q8NGC2 313 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 PMEPA1Q969W9 287 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 CERS2Q96G23 380 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 HGH1Q9BTY7 390 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 TFB2MQ9H5Q4 396 aaKnown RBP21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 LATS2Q9NRM7 1088 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 HRASLS2Q9NWW9 162 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 AKAP7Q9P0M2 348 aaPredicted RBP21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 SEMA5BQ9P283 1151 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 ZC3H7BQ9UGR2 993 aaKnown RBP21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 VPS9D1Q9Y2B5 631 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 PCDHGA7Q9Y5G6 932 aa21.82■■□□□ 1.08
ECHDC1-203ENST00000368291 OR6C74A6NCV1 312 aa21.81■■□□□ 1.08
ECHDC1-203ENST00000368291 C9orf172C9J069 976 aa21.81■■□□□ 1.08
ECHDC1-203ENST00000368291 H3BMM5 538 aa21.81■■□□□ 1.08
ECHDC1-203ENST00000368291 KIF2AO00139 706 aaPredicted RBP21.81■■□□□ 1.08
ECHDC1-203ENST00000368291 TOX3O15405 576 aaPredicted RBP21.81■■□□□ 1.08
ECHDC1-203ENST00000368291 HAUS5O94927 633 aa21.81■■□□□ 1.08
ECHDC1-203ENST00000368291 PDIA2Q13087 525 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms