RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 RPL5P46777 297 aaKnown RBP12.1□□□□□ -0.47
PTPRK-203ENST00000368207 ERVK-8P63133 956 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 UBAP2Q5T6F2 1119 aaKnown RBP12.1□□□□□ -0.47
PTPRK-203ENST00000368207 CST9Q5W186 159 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 ADAMTS15Q8TE58 950 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 BRINP2Q9C0B6 783 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 KLHL1Q9NR64 748 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 MAP1BP46821 2468 aaKnown RBP12.1□□□□□ -0.47
PTPRK-203ENST00000368207 TSPAN19P0C672 248 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 GLDCP23378 1020 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 RFC2P35250 354 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 ACTR1BP42025 376 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 YAP1P46937 504 aaKnown RBP12.1□□□□□ -0.47
PTPRK-203ENST00000368207 CASP9P55211 416 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 ACTR1AP61163 376 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 HSPB3Q12988 150 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 MRPL28Q13084 256 aaKnown RBP12.1□□□□□ -0.47
PTPRK-203ENST00000368207 BIKQ13323 160 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 TIFABQ6ZNK6 161 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 OR52J3Q8NH60 311 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 WDR36Q8NI36 951 aaKnown RBP12.1□□□□□ -0.47
PTPRK-203ENST00000368207 FEM1AQ9BSK4 669 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 ATP6V1HQ9UI12 483 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 OGDHLQ9ULD0 1010 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 PPM1HQ9ULR3 514 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 CCDC189A1A4V9 331 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 UPK3BL1B0FP48 263 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 UPK3BL2E5RIL1 263 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 KLF11O14901 512 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 MGRN1O60291 552 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 RFPL2O75678 378 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 PDE9AO76083 593 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 CCNYL3P0C7X3 344 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 SCAPQ12770 1279 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 GRSF1Q12849 480 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTPRK-203ENST00000368207 MTAPQ13126 283 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 NAIF1Q69YI7 327 aaPredicted RBP12.09□□□□□ -0.47
PTPRK-203ENST00000368207 C2CD4AQ8NCU7 369 aaPredicted RBP12.09□□□□□ -0.47
PTPRK-203ENST00000368207 SLC9A6Q92581 669 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 KCNA7Q96RP8 456 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 MRPS33Q9Y291 106 aaKnown RBP12.09□□□□□ -0.47
PTPRK-203ENST00000368207 OR1I1O60431 355 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 OR6A2O95222 327 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 RHOP08100 348 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 PFKMP08237 780 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 ETS2P15036 469 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 NR1H2P55055 460 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 KLHL35Q6PF15 583 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 MRPL10Q7Z7H8 261 aaKnown RBP12.09□□□□□ -0.47
PTPRK-203ENST00000368207 ARFGAP1Q8N6T3 406 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 IRF7Q92985 503 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 SCAMP4Q969E2 229 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 ROPN1LQ96C74 230 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 RAD9AQ99638 391 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 TRMT61BQ9BVS5 477 aaKnown RBP12.09□□□□□ -0.47
PTPRK-203ENST00000368207 WDR26Q9H7D7 661 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 RASSF1Q9NS23 344 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 MAT2BQ9NZL9 334 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 CDH3P22223 829 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 DGKQP52824 942 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 UGT2B15P54855 530 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 GRM2Q14416 872 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 FRMD7Q6ZUT3 714 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 HMGB4Q8WW32 186 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 ZNF514Q96K75 400 aaPredicted RBP12.09□□□□□ -0.47
PTPRK-203ENST00000368207 FAM192AQ9GZU8 254 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 RUVBL1Q9Y265 456 aaKnown RBP12.09□□□□□ -0.47
PTPRK-203ENST00000368207 FAM25AB3EWG3 89 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 FAM25CB3EWG5 89 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 FAM25GB3EWG6 89 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 TGFB1P01137 390 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 ATP1B2P14415 290 aaPredicted RBP12.09□□□□□ -0.47
PTPRK-203ENST00000368207 RPL10P27635 214 aaKnown RBP12.09□□□□□ -0.47
PTPRK-203ENST00000368207 CMPK1P30085 196 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 VIPR1P32241 457 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 SMIM11AP58511 58 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 ATP1A4Q13733 1029 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 GPRC6AQ5T6X5 926 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 MACC1Q6ZN28 852 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 TRIM74Q86UV6 250 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 TXNDC5Q8NBS9 432 aaKnown RBP12.09□□□□□ -0.47
PTPRK-203ENST00000368207 C11orf65Q8NCR3 313 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 ZSCAN5AQ9BUG6 496 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 TTLL2Q9BWV7 592 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 CARS2Q9HA77 564 aaKnown RBP12.09□□□□□ -0.47
PTPRK-203ENST00000368207 FBRSL1Q9HCM7 1045 aaKnown RBP12.09□□□□□ -0.47
PTPRK-203ENST00000368207 SEMA3GQ9NS98 782 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 POLR1DQ9Y2S0 133 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 PRKAB1Q9Y478 270 aa12.09□□□□□ -0.47
PTPRK-203ENST00000368207 COL22A1Q8NFW1 1626 aaPredicted RBP12.08□□□□□ -0.47
PTPRK-203ENST00000368207 LCHNA4D1U4 455 aa12.08□□□□□ -0.48
PTPRK-203ENST00000368207 PRR23D1E9PI22 279 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-203ENST00000368207 K7ERQ8 282 aa12.08□□□□□ -0.48
PTPRK-203ENST00000368207 PITPNM1O00562 1244 aa12.08□□□□□ -0.48
PTPRK-203ENST00000368207 POP7O75817 140 aaKnown RBP12.08□□□□□ -0.48
PTPRK-203ENST00000368207 CCNDBP1O95273 360 aa12.08□□□□□ -0.48
PTPRK-203ENST00000368207 PRR23D2P0DMB1 279 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-203ENST00000368207 DDX6P26196 483 aaKnown RBP eCLIP12.08□□□□□ -0.481e-7■■■■■ 60
PTPRK-203ENST00000368207 LMAN2Q12907 356 aa12.08□□□□□ -0.48
PTPRK-203ENST00000368207 TMEM214Q6NUQ4 689 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms