RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ALDH1A1P00352 501 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 RETP07949 1114 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 CBSLP0DN79 551 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 IRF1P10914 325 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 OR1D2P34982 312 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 CBSP35520 551 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 SOX11P35716 441 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 GALK1P51570 392 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 GABARAPL2P60520 117 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 NFATC2Q13469 925 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 TTLL9Q3SXZ7 439 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 GPRC6AQ5T6X5 926 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 GPR107Q5VW38 600 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 ATG9BQ674R7 924 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 KLHL35Q6PF15 583 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 DBF4BQ8NFT6 615 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 PJA1Q8NG27 643 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 RHBDF1Q96CC6 855 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 THAP11Q96EK4 314 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 EGFL8Q99944 293 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 CLMPQ9H6B4 373 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 ZFYVE1Q9HBF4 777 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 LRTM1Q9HBL6 345 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 LATS2Q9NRM7 1088 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 TBCCD1Q9NVR7 557 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 VAPAQ9P0L0 249 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.02□□□□□ -0.16
CD48-201ENST00000368045 V9GYQ6 96 aa14.02□□□□□ -0.16
CD48-201ENST00000368045 A0A1W2PQ45 241 aaPredicted RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 A0A1W2PQY0 241 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 NT5C1B-RDH14C9J2C7 533 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 G3V2T6 193 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 MANBAO00462 879 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 NBNO60934 754 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 ABCB7O75027 752 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 SOCS5O75159 536 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 SEC14L2O76054 403 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 SLC25A14O95258 325 aaPredicted RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 ATE1O95260 518 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 ACRV1P26436 265 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 MZF1P28698 734 aaPredicted RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 NRIP1P48552 1158 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 HNRNPFP52597 415 aaKnown RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 TOP3AQ13472 1001 aaPredicted RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 BFSP2Q13515 415 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 PLCL1Q15111 1095 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 PTPRRQ15256 657 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 SKIV2LQ15477 1246 aaKnown RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 IMPG1Q17R60 797 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 RUNDC3AQ59EK9 446 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 FAM151BQ6UXP7 276 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 MICU2Q8IYU8 434 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 CBARPQ8N350 705 aaPredicted RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 ZNF555Q8NEP9 628 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 SLC22A17Q8WUG5 538 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 BCL7CQ8WUZ0 217 aaPredicted RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 FIG4Q92562 907 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 USP7Q93009 1102 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 BORCS5Q969J3 196 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 SLC47A1Q96FL8 570 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 RBM4BQ9BQ04 359 aaKnown RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 HTATIP2Q9BUP3 242 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 THUMPD3Q9BV44 507 aaKnown RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 RBM4Q9BWF3 364 aaKnown RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 ASB8Q9H765 288 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 STARD7Q9NQZ5 370 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 ADGRE2Q9UHX3 823 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 ZMYM5Q9UJ78 669 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 BLOC1S6Q9UL45 172 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 TBKBP1A7MCY6 615 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 FAM220BPB1ANY3 271 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 ARVCFO00192 962 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 GFRA2O00451 464 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 CXCR6O00574 342 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 ERN1O75460 977 aaKnown RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 PRAMEF12O95522 483 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 PGRP06401 933 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 CTPS1P17812 591 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 SHMT2P34897 504 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 FAM174BQ3ZCQ3 159 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 ATXN7L2Q5T6C5 722 aaPredicted RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 TPGS2Q68CL5 300 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 GRAMD4Q6IC98 578 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 TMEM26Q6ZUK4 368 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 GPR149Q86SP6 731 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 METTL3Q86U44 580 aaKnown RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 TMEM173Q86WV6 379 aaPredicted RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 CRIPAKQ8N1N5 446 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 LIX1Q8N485 282 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 ALG14Q96F25 216 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 C2orf49Q9BVC5 232 aaPredicted RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 OSBPL10Q9BXB5 764 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 RNF38Q9H0F5 515 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 TOR3AQ9H497 397 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 SOX17Q9H6I2 414 aaPredicted RBP14.01□□□□□ -0.17
CD48-201ENST00000368045 ACTR8Q9H981 624 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 IL26Q9NPH9 171 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 C1orf109Q9NX04 203 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 HCSTQ9UBK5 93 aa14.01□□□□□ -0.17
CD48-201ENST00000368045 LIMD1Q9UGP4 676 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms