RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CLDN19Q8N6F1 224 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 LRCH3Q96II8 777 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 HEPHQ9BQS7 1158 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 APOL5Q9BWW9 433 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 SLC52A3Q9NQ40 469 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 EIF3LQ9Y262 564 aaKnown RBP13.76□□□□□ -0.21
USF1-202ENST00000368020 PRSS21Q9Y6M0 314 aa13.76□□□□□ -0.21
USF1-202ENST00000368020 MYOFQ9NZM1 2061 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 PLXNA2O75051 1894 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 TSPAN11A1L157 253 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 DPPA5A6NC42 116 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 FXYD1O00168 92 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 ARNTLO00327 626 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 NME4O00746 187 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 LSM1O15116 133 aaKnown RBP13.75□□□□□ -0.21
USF1-202ENST00000368020 HNRNPRO43390 633 aaKnown RBP13.75□□□□□ -0.21
USF1-202ENST00000368020 KIF1CO43896 1103 aaKnown RBP13.75□□□□□ -0.21
USF1-202ENST00000368020 NUAK1O60285 661 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 MOSPD3O75425 235 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 GPIP06744 558 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 FCGR1AP12314 374 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 JAK1P23458 1154 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 SLC6A2P23975 617 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 PSMA4P25789 261 aaKnown RBP13.75□□□□□ -0.21
USF1-202ENST00000368020 VIPR1P32241 457 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 GGT5P36269 586 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 FOLH1Q04609 750 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 MAP7Q14244 749 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 FBXO48Q5FWF7 155 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 LRRC70Q7Z2Q7 622 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 PTRH1Q86Y79 214 aaKnown RBP13.75□□□□□ -0.21
USF1-202ENST00000368020 SLC15A3Q8IY34 581 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 AADATQ8N5Z0 425 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 C12orf76Q8N812 135 aaPredicted RBP13.75□□□□□ -0.21
USF1-202ENST00000368020 TMEM102Q8N9M5 508 aaPredicted RBP13.75□□□□□ -0.21
USF1-202ENST00000368020 GLB1L3Q8NCI6 653 aaPredicted RBP13.75□□□□□ -0.21
USF1-202ENST00000368020 FAM156AQ8NDB6 213 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 OR2T11Q8NH01 316 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 LKAAEAR1Q8TD35 194 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 EME1Q96AY2 570 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 TRAPPC9Q96Q05 1148 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 ZBTB18Q99592 522 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 PKP2Q99959 881 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 ASIC5Q9NY37 505 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 CCL26Q9Y258 94 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 AP3M1Q9Y2T2 418 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 PCDHA9Q9Y5H5 950 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 C2orf16Q68DN1 1984 aa13.75□□□□□ -0.21
USF1-202ENST00000368020 NUP210Q8TEM1 1887 aaPredicted RBP13.75□□□□□ -0.21
USF1-202ENST00000368020 TAPBPO15533 448 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 LINC01565O15544 149 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 ULK1O75385 1050 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 STK16O75716 305 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 GUCA1CO95843 209 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 KRT6AP02538 564 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 KRT6BP04259 564 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 SRPRAP08240 638 aaKnown RBP13.74□□□□□ -0.21
USF1-202ENST00000368020 HIST1H2AGP0C0S8 130 aaPredicted RBP13.74□□□□□ -0.21
USF1-202ENST00000368020 UMPSP11172 480 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 ITGB6P18564 788 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 HIST1H2ADP20671 130 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 IL10P22301 178 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 WEE1P30291 646 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 KRT6CP48668 564 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 HSPA7P48741 367 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 CHN2P52757 468 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 AP1S2P56377 157 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 NME5P56597 212 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 GRM2Q14416 872 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 GBX1Q14549 363 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 PDK3Q15120 406 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 SLC5A9Q2M3M2 681 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 GGTA1PQ4G0N0 100 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 ATP13A5Q4VNC0 1218 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 IL23RQ5VWK5 629 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 Q6ZSR9 355 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 TRIM46Q7Z4K8 759 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 DNAJB8Q8NHS0 232 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 WFIKKN2Q8TEU8 576 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 ESAMQ96AP7 390 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 HIST1H2AHQ96KK5 128 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 ACOX2Q99424 681 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 HIST1H2AJQ99878 128 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 H2AFJQ9BTM1 129 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 SMG9Q9H0W8 520 aaKnown RBP13.74□□□□□ -0.21
USF1-202ENST00000368020 PCDHAC1Q9H158 963 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 ALG2Q9H553 416 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 SLC32A1Q9H598 525 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 PARVBQ9HBI1 364 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 CLEC1BQ9P126 229 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 DKK3Q9UBP4 350 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 B4GALT6Q9UBX8 382 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 GIMAP2Q9UG22 337 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 ERVW-1Q9UQF0 538 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 MRPS23Q9Y3D9 190 aaKnown RBP13.74□□□□□ -0.21
USF1-202ENST00000368020 ASB1Q9Y576 335 aa13.74□□□□□ -0.21
USF1-202ENST00000368020 TXNDC9O14530 226 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 BNIP3LO60238 219 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 FTH1P02794 183 aa13.73□□□□□ -0.21
USF1-202ENST00000368020 C1SP09871 688 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms