RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CATSPERZQ9NTU4 200 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 MED9Q9NWA0 146 aa3.71□□□□□ -1.82
SYNE1-207ENST00000367255 URADA6NGE7 173 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 FBP2O00757 339 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ADAMTS3O15072 1205 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 AHSA1O95433 338 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 IL1AP01583 271 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 THEGLP0DJG4 465 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 GDI1P31150 447 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 KCTD2Q14681 263 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RNF217Q8TC41 542 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SAMD11Q96NU1 681 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RPF1Q9H9Y2 349 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 S100A14Q9HCY8 104 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 DAGLAQ9Y4D2 1042 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 PTGES3LE9PB15 166 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 INO80B-WBP1J3KQ70 363 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SHOXO15266 292 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CDH1P12830 882 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RFC4P35249 363 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RNASEH2BQ5TBB1 312 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SLC51BQ86UW2 128 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 BTBD1Q9H0C5 482 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SLC17A5Q9NRA2 495 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 NRG3P56975 720 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 GPR162Q16538 588 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ALG1LQ6GMV1 187 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ARHGAP12Q8IWW6 846 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF786Q8N393 782 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 C7orf31Q8N865 590 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CHRDQ9H2X0 955 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 NMNAT1Q9HAN9 279 aaPredicted RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF541Q9H0D2 1346 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 DISC1C4P0D8 188 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 HSPA12AO43301 675 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ABHD16AO95870 558 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 MBL2P11226 248 aaPredicted RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CEBPBP17676 345 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RAP2BP61225 183 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 FAM214AQ32MH5 1076 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 COL13A1Q5TAT6 717 aaPredicted RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 PPM1KQ8N3J5 372 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 COQ8AQ8NI60 647 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RTP4Q96DX8 246 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 TKTL2Q9H0I9 626 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 OR51V1Q9H2C8 321 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CHKBQ9Y259 395 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 LYVE1Q9Y5Y7 322 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SNRNP35Q16560 246 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SLC44A5Q8NCS7 719 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 DNERQ8NFT8 737 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 KDM5AP29375 1690 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 DUOX1Q9NRD9 1551 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 MOXD2PA6NHM9 499 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RRN3P2A6NIE6 340 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 GSC2O15499 205 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SEC14L5O43304 696 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ABCB7O75027 752 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 OXA1LQ15070 435 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 HIST2H2ACQ16777 129 aaPredicted RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 HIST2H2AA3Q6FI13 130 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SLC35B2Q8TB61 432 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ITFG1Q8TB96 612 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 BTBD2Q9BX70 525 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CYP21A2P08686 494 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CYP11B1P15538 503 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SPOUT1Q5T280 376 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SLC22A25Q6T423 547 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ATXN7L3BQ96GX2 97 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CCSER2Q9H7U1 834 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CHRAC1Q9NRG0 131 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 APRTP07741 180 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SPP1P10451 314 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RNLSQ5VYX0 342 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ERMP1Q7Z2K6 904 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ZFP90Q8TF47 636 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 MKRN2Q9H000 416 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 PTCH2Q9Y6C5 1203 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 MATN4O95460 622 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RLN2P04090 185 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 PIPP12273 146 aaPredicted RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 KCNA6P17658 529 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 IGFALSP35858 605 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RASGEF1BQ0VAM2 473 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF311Q5JNZ3 666 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 AFTPHQ6ULP2 937 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 LRP11Q86VZ4 500 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 GPR65Q8IYL9 337 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 OR1J4Q8NGS1 313 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SLC35G2Q8TBE7 412 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 SPATA13Q96N96 652 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 CALCRP30988 508 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 RPS8P62241 208 aaKnown RBP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ZRANB3Q5FWF4 1079 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 ZSWIM9Q86XI8 627 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 WDSUB1Q8N9V3 476 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 KBTBD7Q8WVZ9 684 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 UPF1Q92900 1129 aaKnown RBP eCLIP3.7□□□□□ -1.82
SYNE1-207ENST00000367255 MMP19Q99542 508 aa3.7□□□□□ -1.82
SYNE1-207ENST00000367255 FARSAQ9Y285 508 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms