RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 LRRC8EQ6NSJ5 796 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 SYNE3Q6ZMZ3 975 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 NOXA1Q86UR1 476 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 NRROSQ86YC3 692 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 HIPK1Q86Z02 1210 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 SLC35F3Q8IY50 421 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 PM20D2Q8IYS1 436 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 UBQLNLQ8IYU4 475 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 KIRREL3Q8IZU9 778 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 TXLNBQ8N3L3 684 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 CPXM2Q8N436 756 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 CERS5Q8N5B7 392 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 C1orf52Q8N6N3 182 aaKnown RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 TMEM116Q8NCL8 245 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 OR1J1Q8NGS3 322 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 KIAA1524Q8TCG1 905 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 UTP15Q8TED0 518 aaKnown RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 GATAD1Q8WUU5 269 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 SREK1Q8WXA9 508 aaKnown RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 APBB2Q92870 758 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 IGSF8Q969P0 613 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 SH3KBP1Q96B97 665 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 RHBDF1Q96CC6 855 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 PPP1R16AQ96I34 528 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF578Q96N58 590 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 SIGLEC12Q96PQ1 595 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 BBS4Q96RK4 519 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 TWNKQ96RR1 684 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 MYADMQ96S97 322 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 NKX3-1Q99801 234 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 OVOL2Q9BRP0 275 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 NUF2Q9BZD4 464 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 OCR1Q9BZK8 76 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 USP44Q9H0E7 712 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 NUP62CLQ9H1M0 184 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 VCXQ9H320 206 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 C10orf88Q9H8K7 445 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 MTHFD2LQ9H903 347 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 SEBOXQ9HB31 216 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF331Q9NQX6 463 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 PLSCR3Q9NRY6 295 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 C1orf112Q9NSG2 853 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 SUFUQ9UMX1 484 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 C19orf53Q9UNZ5 99 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 PA2G4Q9UQ80 394 aaKnown RBP-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 CDC42BPBQ9Y5S2 1711 aa-0.11□□□□□ -2.43
RNU6-54P-201ENST00000365563 NLRC5Q86WI3 1866 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 MYO10Q9HD67 2058 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 RUSC2Q8N2Y8 1516 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 MTMR11A4FU01 709 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 TMEM150BA6NC51 233 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAM90A18PA6NE21 464 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAM90A16PA6NEW6 464 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 MFSD2BA6NFX1 497 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 EPOPA6NHQ4 379 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAM90A9PA6NNJ1 464 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAM90A5PA8MXJ8 464 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF878C9JN71 531 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 EEF2KO00418 725 aaKnown RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 APOL1O14791 398 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 DNPH1O43598 174 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 AVILO75366 819 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 DEDDO75618 318 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 SEC24AO95486 1093 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 C6orf47O95873 294 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 MT-CYBP00156 380 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 MT-ND1P03886 318 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 VTNP04004 478 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 QDPRP09417 244 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAM90A15PP0C7V4 464 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAM90A14PP0C7W9 464 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZCCHC18P0CG32 403 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 U2AF1L5P0DN76 240 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 SLC2A2P11168 524 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF14P17017 642 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 HSD3B2P26439 372 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 POU1F1P28069 291 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 SERPINA4P29622 427 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 HTR1FP30939 366 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 HOXC9P31274 260 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 GGT5P36269 586 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 MCM2P49736 904 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 ATP4BP51164 291 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 CLDN2P57739 230 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 KRTAP12-1P59990 96 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 IRX4P78413 519 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 FKBP3Q00688 224 aaKnown RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 SORDQ00796 357 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 U2AF1Q01081 240 aaKnown RBP eCLIP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 NAAAQ02083 359 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 NAE1Q13564 534 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 KIAA0040Q15053 153 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF146Q15072 292 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 MPPED2Q15777 294 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 HIST2H2ACQ16777 129 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 KIAA0753Q2KHM9 967 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 GSG1Q2KHT4 349 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 FBXO43Q4G163 708 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 PDLIM3Q53GG5 364 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 DCAF10Q5QP82 559 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms