RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 DHRS7Q9Y394 339 aa6.65□□□□□ -1.34
RNU1-55P-201ENST00000365510 DNMT3AQ9Y6K1 912 aaPredicted RBP6.65□□□□□ -1.34
RNU1-55P-201ENST00000365510 FLNBO75369 2602 aaKnown RBP6.65□□□□□ -1.34
RNU1-55P-201ENST00000365510 A0A1B0GTW7 788 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 C17orf113A0A1B0GUU1 675 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 CCDC189A1A4V9 331 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 TMEM202A6NGA9 273 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 FOXO6A8MYZ6 492 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 LIN7AO14910 233 aaPredicted RBP6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 KMOO15229 486 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 TM9SF1O15321 606 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 BCAT2O15382 392 aaPredicted RBP6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 TLX3O43711 291 aaPredicted RBP6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 SGTAO43765 313 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 TYROBPO43914 113 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 SPAG7O75391 227 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 C1QL1O75973 258 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 KLHL2O95198 593 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 WISP3O95389 354 aaPredicted RBP6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 CEACAM5P06731 702 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 CCDC166P0CW27 439 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 MYF5P13349 255 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 DGKAP23743 735 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 AOAHP28039 575 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 CD38P28907 300 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 DPP6P42658 865 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 MAPK9P45984 424 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 GNPDA1P46926 289 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 BLKP51451 505 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 AFF3P51826 1226 aaKnown RBP6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 SLC18A1P54219 525 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 C21orf59P57076 290 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 ATP6V0D1P61421 351 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 IRF9Q00978 393 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 TIAL1Q01085 375 aaKnown RBP eCLIP6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 HSPA14Q0VDF9 509 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 LRP8Q14114 963 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 TEAD4Q15561 434 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 CCDC153Q494R4 210 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 PLEKHS1Q5SXH7 462 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 PAQR3Q6TCH7 311 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 KDM7AQ6ZMT4 941 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 SH2D5Q6ZV89 423 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 TMPRSS7Q7RTY8 843 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 CLEC14AQ86T13 490 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 ADAMTSL2Q86TH1 951 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 AMZ2Q86W34 360 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 PARGQ86W56 976 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 ZNF547Q8IVP9 402 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 CPNE9Q8IYJ1 553 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 CENPLQ8N0S6 344 aaPredicted RBP6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 SLC22A18ASQ8N1D0 253 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 MYO1HQ8N1T3 1032 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 OXR1Q8N573 874 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 BANPQ8N9N5 519 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 MFSD2AQ8NA29 543 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 CCDC63Q8NA47 563 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 OR2L2Q8NH16 312 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 KCTD4Q8WVF5 259 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 SKA2Q8WVK7 121 aaPredicted RBP6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 DNASE2BQ8WZ79 361 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 GLMNQ92990 594 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 KLHDC7BQ96G42 594 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 PDXPQ96GD0 296 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 SCARF2Q96GP6 870 aaPredicted RBP6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 SCYL1Q96KG9 808 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 BMFQ96LC9 184 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 OR2M4Q96R27 311 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 TIMM29Q9BSF4 260 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 DERL2Q9GZP9 239 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 DPEP2Q9H4A9 486 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 COG4Q9H9E3 785 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 CARS2Q9HA77 564 aaKnown RBP6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 NMRAL1Q9HBL8 299 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 CYP4F12Q9HCS2 524 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 FGF22Q9HCT0 170 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 TM9SF3Q9HD45 589 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 LATS2Q9NRM7 1088 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 GPR27Q9NS67 375 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 IGSF5Q9NSI5 407 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 FAM8A1Q9UBU6 413 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 DCDC2Q9UHG0 476 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 ZNHIT2Q9UHR6 403 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 GRID1Q9ULK0 1009 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 SUFUQ9UMX1 484 aa6.64□□□□□ -1.35
RNU1-55P-201ENST00000365510 SPTY2D1-AS1A0A0U1RR47 76 aa6.63□□□□□ -1.35
RNU1-55P-201ENST00000365510 PABPN1LA6NDY0 278 aaKnown RBP6.63□□□□□ -1.35
RNU1-55P-201ENST00000365510 NPEPPSL1A6NEC2 478 aa6.63□□□□□ -1.35
RNU1-55P-201ENST00000365510 MGAT4DA6NG13 374 aa6.63□□□□□ -1.35
RNU1-55P-201ENST00000365510 SYCE1LA8MT33 242 aa6.63□□□□□ -1.35
RNU1-55P-201ENST00000365510 H3BM21 787 aa6.63□□□□□ -1.35
RNU1-55P-201ENST00000365510 LOC400499M0QZD8 3231 aa6.63□□□□□ -1.35
RNU1-55P-201ENST00000365510 TLR4O00206 839 aa6.63□□□□□ -1.35
RNU1-55P-201ENST00000365510 BTN3A1O00481 513 aa6.63□□□□□ -1.35
RNU1-55P-201ENST00000365510 TDRD6O60522 2096 aaKnown RBP6.63□□□□□ -1.35
RNU1-55P-201ENST00000365510 KCNJ13O60928 360 aa6.63□□□□□ -1.35
RNU1-55P-201ENST00000365510 POP7O75817 140 aaKnown RBP6.63□□□□□ -1.35
RNU1-55P-201ENST00000365510 RASGRP1O95267 797 aa6.63□□□□□ -1.35
RNU1-55P-201ENST00000365510 WNT1P04628 370 aa6.63□□□□□ -1.35
RNU1-55P-201ENST00000365510 RBP1P09455 135 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms