RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 HAT1O14929 419 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 TFECO14948 347 aaPredicted RBP1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 ATP2A1O14983 1001 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 SMAD9O15198 467 aaKnown RBP1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 GALR3O60755 368 aaPredicted RBP1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 LY6G6DO95868 133 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 HNRNPA1P09651 372 aaKnown RBP eCLIP1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 IFIT1P09914 478 aaKnown RBP1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 CA4P22748 312 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 TSFMP43897 325 aaKnown RBP1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 LMAN1P49257 510 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 EIF3BP55884 814 aaKnown RBP1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 KRTAP10-10P60014 251 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 NDPQ00604 133 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 UBE3AQ05086 875 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 FCHO2Q0JRZ9 810 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 C20orf194Q5TEA3 1177 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 RNLSQ5VYX0 342 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 ZFAND4Q86XD8 727 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 KIRREL3Q8IZU9 778 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 METTL4Q8N3J2 472 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 CPSF7Q8N684 471 aaKnown RBP1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 KLHDC1Q8N7A1 406 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 CENPTQ96BT3 561 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 SERAC1Q96JX3 654 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 EGLN2Q96KS0 407 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 LGMNQ99538 433 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 TTYH1Q9H313 450 aaPredicted RBP1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 CPVLQ9H3G5 476 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 MTMR10Q9NXD2 777 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 INTS6Q9UL03 887 aaKnown RBP1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 ANGPTL3Q9Y5C1 460 aa1.53□□□□□ -2.16
RNU6-238P-201ENST00000363313 ARHGEF40Q8TER5 1519 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 ELOVL7A1L3X0 281 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 J3QR06 171 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 ZNF195O14628 629 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 LDLRAD4O15165 306 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 PRC1O43663 620 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 CCNDBP1O95273 360 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 TAS2R40P59535 323 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 TFAP4Q01664 338 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 DLG2Q15700 870 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 NOTUMQ6P988 496 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 SLC25A47Q6Q0C1 308 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 CDHR3Q6ZTQ4 885 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 CCDC190Q86UF4 302 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 OR6S1Q8NH40 331 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 TRPC4APQ8TEL6 797 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 SMAP2Q8WU79 429 aaPredicted RBP1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 GCC1Q96CN9 775 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 SAAL1Q96ER3 474 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 SLC22A12Q96S37 553 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 STRA6Q9BX79 667 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 PIGMQ9H3S5 423 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 ASB8Q9H765 288 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 SDR39U1Q9NRG7 319 aaPredicted RBP1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 GTSE1Q9NYZ3 720 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 OR6C2Q9NZP2 312 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 DBNLQ9UJU6 430 aaKnown RBP1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 RIPOR2Q9Y4F9 1068 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 WIPI2Q9Y4P8 454 aa1.52□□□□□ -2.17
RNU6-238P-201ENST00000363313 E9PI62 339 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 HIST1H2ABP04908 130 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 HIST1H2ADP20671 130 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 HALP42357 657 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 PPIAP62937 165 aaKnown RBP1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 GUCY2DQ02846 1103 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 PTP4A2Q12974 167 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 PRICKLE4Q2TBC4 344 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 CCDC174Q6PII3 467 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 HIST3H2AQ7L7L0 130 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 CHPT1Q8WUD6 406 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 FNBP1Q96RU3 617 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 MAP7D2Q96T17 732 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 GPN1Q9HCN4 374 aaPredicted RBP1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 MAN2C1Q9NTJ4 1040 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 ADAM22Q9P0K1 906 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 CSNK1G3Q9Y6M4 447 aa1.51□□□□□ -2.17
RNU6-238P-201ENST00000363313 UMODL1Q5DID0 1318 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 EIF3CLB5ME19 914 aaKnown RBP1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 TMEM189-UBE2V1I3L0A0 370 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 SLC25A12O75746 678 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 CEACAM4O75871 244 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 NKX2-2O95096 273 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 KCNK5O95279 499 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 IGKV3-11P04433 115 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 CHKAP35790 457 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 GRK6P43250 576 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 UBE2V1Q13404 147 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 BAK1Q16611 211 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 C2orf83Q53S99 150 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 HERC4Q5GLZ8 1057 aaPredicted RBP1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 GCNT6Q5T4J0 391 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 ADALQ6DHV7 355 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 SEPT14Q6ZU15 432 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 CEP97Q8IW35 865 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 ARHGAP12Q8IWW6 846 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 PRR22Q8IZ63 422 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 MYCT1Q8N699 235 aa1.5□□□□□ -2.17
RNU6-238P-201ENST00000363313 AQP11Q8NBQ7 271 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms