RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 COPS7BQ9H9Q2 264 aaPredicted RBP3.58□□□□□ -1.84
RNU6-28P-201ENST00000362378 MYNNQ9NPC7 610 aa3.58□□□□□ -1.84
RNU6-28P-201ENST00000362378 OSER1Q9NX31 292 aa3.58□□□□□ -1.84
RNU6-28P-201ENST00000362378 MIOSQ9NXC5 875 aa3.58□□□□□ -1.84
RNU6-28P-201ENST00000362378 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.58□□□□□ -1.84
RNU6-28P-201ENST00000362378 KCNS2Q9ULS6 477 aa3.58□□□□□ -1.84
RNU6-28P-201ENST00000362378 ABT1Q9ULW3 272 aaKnown RBP3.58□□□□□ -1.84
RNU6-28P-201ENST00000362378 VDAC3Q9Y277 283 aa3.58□□□□□ -1.84
RNU6-28P-201ENST00000362378 PADI2Q9Y2J8 665 aa3.58□□□□□ -1.84
RNU6-28P-201ENST00000362378 A0A0G2JPF8 293 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 TEX13DA0A0J9YY54 714 aaPredicted RBP3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 MED19A0JLT2 244 aaPredicted RBP3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 CTAGE9A4FU28 777 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 PRR32B1ATL7 298 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 HNRNPCL3B7ZW38 293 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 STX6O43752 255 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 GBAP04062 536 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 CTAGE8P0CG41 777 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 HNRNPCL4P0DMR1 293 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 DAOP14920 347 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 CSF2RAP15509 400 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 PDGFRAP16234 1089 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 ITGA2P17301 1181 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 MPZP25189 248 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 CCKBRP32239 447 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 AMPHP49418 695 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 MMP15P51511 669 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 RELQ04864 619 aaPredicted RBP3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 CGNL1Q0VF96 1302 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 E2F5Q15329 346 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 ASIC2Q16515 512 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 SLC10A5Q5PT55 438 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 OR7E24Q6IFN5 339 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 MOXD1Q6UVY6 613 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 PLXDC2Q6UX71 529 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 RAD9BQ6WBX8 426 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 C11orf57Q6ZUT1 292 aaPredicted RBP3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 ZNF575Q86XF7 245 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 CTAGE4Q8IX94 777 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 TIGD4Q8IY51 512 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 SIX6OS1Q8N1H7 587 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 CPSF7Q8N684 471 aaKnown RBP3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 L3MBTL4Q8NA19 623 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 OR5M8Q8NGP6 311 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 OCC1Q8TAD7 63 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 LNX1Q8TBB1 728 aaPredicted RBP3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 SEMA4DQ92854 862 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 DAZLQ92904 295 aaKnown RBP3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 MOB3AQ96BX8 217 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 EBF2Q9HAK2 575 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 KLHL1Q9NR64 748 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 SNX7Q9UNH6 387 aa3.57□□□□□ -1.84
RNU6-28P-201ENST00000362378 A0A0G2JNG1 304 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 MAGEA13PA6NCF6 341 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 NEMP2A6NFY4 417 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 C4orf47A7E2U8 309 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 DNM1LO00429 736 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 MEIS2O14770 477 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 WDPCPO95876 746 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 IGHV2-70P01814 119 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 TFAP2AP05549 437 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 ACAA1P09110 424 aaPredicted RBP3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 FAM58BPP0C7Q3 252 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 CD22P20273 847 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 PTPN3P26045 913 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 TKTP29401 623 aaKnown RBP3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 OAS2P29728 719 aaKnown RBP3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 AHRP35869 848 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 LHX1P48742 406 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 MLLT10P55197 1068 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 LINC00205P59089 165 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 MAT1AQ00266 395 aaKnown RBP3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 LTBQ06643 244 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 KIF5AQ12840 1032 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 PRKAA1Q13131 559 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 PTK6Q13882 451 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 KIR2DS5Q14953 304 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 MEP1BQ16820 701 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 TYSND1Q2T9J0 566 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 TWISTNBQ3B726 338 aaPredicted RBP3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 MDH1BQ5I0G3 518 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 SFMBT2Q5VUG0 894 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 FAM91A1Q658Y4 838 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 AWAT2Q6E213 333 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 MFSD12Q6NUT3 480 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 PACS1Q6VY07 963 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 PIWIL3Q7Z3Z3 882 aaKnown RBP3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 TMPRSS11BQ86T26 416 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 TLK2Q86UE8 772 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 IQCA1Q86XH1 822 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 PTOV1Q86YD1 416 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 MUC20Q8N307 709 aaPredicted RBP3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 ZNF611Q8N823 705 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 PPFIBP2Q8ND30 876 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 GRAPLQ8TC17 118 aaPredicted RBP3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 SMG7Q92540 1137 aaKnown RBP3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 DHX58Q96C10 678 aa3.56□□□□□ -1.84
RNU6-28P-201ENST00000362378 OTUB1Q96FW1 271 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms