RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 POLR3BQ9NW08 1133 aaPredicted RBP18.73■□□□□ 0.59
CMTM3-201ENST00000361909 GIMAP2Q9UG22 337 aa18.73■□□□□ 0.59
CMTM3-201ENST00000361909 AP3M1Q9Y2T2 418 aa18.73■□□□□ 0.59
CMTM3-201ENST00000361909 PTGDR2Q9Y5Y4 395 aa18.73■□□□□ 0.59
CMTM3-201ENST00000361909 V9GYQ6 96 aa18.73■□□□□ 0.59
CMTM3-201ENST00000361909 PATJQ8NI35 1801 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 SNX2O60749 519 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 ANGPTL1O95841 491 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 LINC00032P0C843 101 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 AGXTP21549 392 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 FDXRP22570 491 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 UGT2B10P36537 528 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 VAC14Q08AM6 782 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 SMARCB1Q12824 385 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 PRKG2Q13237 762 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 PLEKHG6Q3KR16 790 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 TIGD7Q6NT04 549 aaPredicted RBP18.72■□□□□ 0.59
CMTM3-201ENST00000361909 VASH1Q7L8A9 365 aaPredicted RBP18.72■□□□□ 0.59
CMTM3-201ENST00000361909 GPRIN1Q7Z2K8 1008 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 ARL10Q8N8L6 244 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 MCFD2Q8NI22 146 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 NDRG1Q92597 394 aaKnown RBP18.72■□□□□ 0.59
CMTM3-201ENST00000361909 PTERQ96BW5 349 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 SNX18Q96RF0 628 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 CLSTN3Q9BQT9 956 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 MAGIXQ9H6Y5 334 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 INTS7Q9NVH2 962 aaKnown RBP18.72■□□□□ 0.59
CMTM3-201ENST00000361909 SCN3BQ9NY72 215 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 OR12D3Q9UGF7 316 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 MIA3Q5JRA6 1907 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 EVPLLA8MZ36 301 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 H7C4K7 107 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 I6L893 689 aaPredicted RBP18.72■□□□□ 0.59
CMTM3-201ENST00000361909 MATN3O15232 486 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 CST1P01037 141 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 SUOXP51687 545 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 FOXA1P55317 472 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 ZNF45Q02386 682 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 CDK5R2Q13319 367 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 EML3Q32P44 896 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 CTXN3Q4LDR2 81 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 SLC39A12Q504Y0 691 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 ZNF789Q5FWF6 425 aa18.72■□□□□ 0.59
CMTM3-201ENST00000361909 TRIM43Q96BQ3 446 aaPredicted RBP18.72■□□□□ 0.59
CMTM3-201ENST00000361909 CARNS1A5YM72 827 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 BCKDKO14874 412 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 SCO2O43819 266 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 FYNP06241 537 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 KCNC1P48547 511 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 CXCR3P49682 368 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 SLC35A2P78381 396 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 PIGFQ07326 219 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 CLCA4Q14CN2 919 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 TMEM207Q6UWW9 146 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 HIPK1Q86Z02 1210 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 RASSF5Q8WWW0 418 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 RPL10LQ96L21 214 aaKnown RBP18.71■□□□□ 0.59
CMTM3-201ENST00000361909 MRGPRX2Q96LB1 330 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 ZNF599Q96NL3 588 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 SMURF2Q9HAU4 748 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 TM9SF3Q9HD45 589 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 DDIT4Q9NX09 232 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.71■□□□□ 0.594e-6■■□□□ 12.2
CMTM3-201ENST00000361909 YJEFN3A6XGL0 299 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 PTGES3LE9PB15 166 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 IDH3BO43837 385 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 DLGAP3O95886 979 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 EFEMP2O95967 443 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 KRT8P05787 483 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 USP17L7P0C7H9 530 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 MAGEA11P43364 429 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 TRPC1P48995 793 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 CDKN2DP55273 166 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 VBP1P61758 197 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 KEAP1Q14145 624 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 TMEM236Q5W0B7 351 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 PNCKQ6P2M8 343 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 ANKS3Q6ZW76 656 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 BHLHA9Q7RTU4 235 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 PAGE2Q7Z2X7 111 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 POC5Q8NA72 575 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 PROX1Q92786 737 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 ZNF689Q96CS4 500 aaPredicted RBP18.71■□□□□ 0.59
CMTM3-201ENST00000361909 CWH43Q9H720 699 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 POLE4Q9NR33 117 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 PCDHGA10Q9Y5H3 936 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 NUP205Q92621 2012 aa18.71■□□□□ 0.59
CMTM3-201ENST00000361909 COL4A4P53420 1690 aaPredicted RBP18.7■□□□□ 0.58
CMTM3-201ENST00000361909 GNGT2O14610 69 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 KMOO15229 486 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 RAD51BO15315 384 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 MAN1A2O60476 641 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 UROSP10746 265 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 ITGB8P26012 769 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 DEFA1P59665 94 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 DEFA3P59666 94 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 DMPKQ09013 629 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 PLA2G4EQ3MJ16 856 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 ZNF404Q494X3 552 aa18.7■□□□□ 0.58
CMTM3-201ENST00000361909 HFE2Q6ZVN8 426 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms