RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SNTA1Q13424 505 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 NFIXQ14938 502 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF829Q3KNS6 432 aaPredicted RBP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 SETD6Q8TBK2 473 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 KCTD7Q96MP8 289 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 TAS2R14Q9NYV8 317 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 KIAA1522Q9P206 1035 aaPredicted RBP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 TLL2Q9Y6L7 1015 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 ARL5CA6NH57 179 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 UBE2Q2LH0YL09 131 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 SCGB1D2O95969 90 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 PLGP00747 810 aaPredicted RBP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 HSD17B2P37059 387 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 GRK6P43250 576 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 FASTKD3Q14CZ7 662 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 LRRN1Q6UXK5 716 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 REPS2Q8NFH8 660 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 OR10H4Q8NGA5 316 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 ZSWIM3Q96MP5 696 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF670Q9BS34 389 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 CD320Q9NPF0 282 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 ICAM3P32942 547 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 SF1Q15637 639 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 DNAJB8Q8NHS0 232 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 RAB11FIP5Q9BXF6 653 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 ASF1AQ9Y294 204 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 SPIN1Q9Y657 262 aaPredicted RBP13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 CYP3A5P20815 502 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 CMPK1P30085 196 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 TBRG1Q3YBR2 411 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 MAB21L3Q8N8X9 362 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 OR2L8Q8NGY9 312 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 GAD1Q99259 594 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 LRRC4CQ9HCJ2 640 aa13.03□□□□□ -0.32
SRGAP3-201ENST00000360413 NCANO14594 1321 aa13.02□□□□□ -0.32
SRGAP3-201ENST00000360413 H3BSA7 217 aa13.02□□□□□ -0.32
SRGAP3-201ENST00000360413 RPL35P42766 123 aaKnown RBP13.02□□□□□ -0.32
SRGAP3-201ENST00000360413 ST3GAL4Q11206 333 aa13.02□□□□□ -0.32
SRGAP3-201ENST00000360413 RALGPS1Q5JS13 557 aa13.02□□□□□ -0.32
SRGAP3-201ENST00000360413 UNC93B1Q9H1C4 597 aa13.02□□□□□ -0.32
SRGAP3-201ENST00000360413 ZNF286BP0CG31 522 aa13.02□□□□□ -0.32
SRGAP3-201ENST00000360413 PGAM2P15259 253 aa13.02□□□□□ -0.32
SRGAP3-201ENST00000360413 CLCN3P51790 818 aa13.02□□□□□ -0.32
SRGAP3-201ENST00000360413 LRRC38Q5VT99 294 aa13.02□□□□□ -0.32
SRGAP3-201ENST00000360413 IQCKQ8N0W5 287 aa13.02□□□□□ -0.32
SRGAP3-201ENST00000360413 LRRC72A6NJI9 287 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 SSTP61278 116 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 HEPACAMQ14CZ8 416 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 TMEM39BQ9GZU3 492 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 ATG10Q9H0Y0 220 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 SERINC1Q9NRX5 453 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 CLCA1A8K7I4 914 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 TTC34A8MYJ7 566 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 TRBC1P01850 177 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 CHRM5P08912 532 aaPredicted RBP13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 LTKP29376 864 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 CTBP1Q13363 440 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 TMEM214Q6NUQ4 689 aaKnown RBP13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 CERS6Q6ZMG9 384 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 TIGD4Q8IY51 512 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 REM2Q8IYK8 340 aaPredicted RBP13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 SIGLEC16A6NMB1 481 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 GRM6O15303 877 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 RENP00797 406 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 CXCL8P10145 99 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 S100A10P60903 97 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 TGFB2P61812 414 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 PFKPQ01813 784 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 FOXRED2Q8IWF2 684 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 ATG4CQ96DT6 458 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 CCDC120Q96HB5 630 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 C7orf26Q96N11 449 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 COPS8Q99627 209 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 OSMRQ99650 979 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 TCF7L1Q9HCS4 588 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 POMPQ9Y244 141 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 SLC1A5Q15758 541 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 BRMS1LQ5PSV4 323 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 PPP1R26Q5T8A7 1209 aaPredicted RBP13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 COMTD1Q86VU5 262 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 HSPA12BQ96MM6 686 aa13.02□□□□□ -0.33
SRGAP3-201ENST00000360413 PDPK1O15530 556 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 COL6A1P12109 1028 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 MERTKQ12866 999 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 SP140Q13342 867 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 C9orf64Q5T6V5 341 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 UNC5BQ8IZJ1 945 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 HASPINQ8TF76 798 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 ZNF347Q96SE7 839 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 DUSP9Q99956 384 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 SLC30A2Q9BRI3 323 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 POLR2J2Q9GZM3 115 aaKnown RBP13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 SMURF1Q9HCE7 757 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 C9J4A7 227 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 GLDCP23378 1020 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 CCR10P46092 362 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 PRKCDQ05655 676 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 MOGQ16653 247 aa13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 FBXO16Q8IX29 292 aaPredicted RBP13.01□□□□□ -0.33
SRGAP3-201ENST00000360413 SPOCK2Q92563 424 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms