RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 GPR34Q9UPC5 381 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 ZZEF1O43149 2961 aa13.57□□□□□ -0.24
PDLIM5-203ENST00000359265 LRP4O75096 1905 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 CEP192Q8TEP8 1941 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 A0A0G2JND7 137 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 NCF1BA6NI72 391 aaPredicted RBP13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 NCF1CA8MVU1 366 aaPredicted RBP13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 FFAR2O15552 330 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 LILRB5O75023 590 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 GPC4O75487 556 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 SUPT7LO94864 414 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 SLCO2B1O94956 709 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 SEMA4FO95754 770 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 CHRNGP07510 517 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 KITP10721 976 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 MYCLP1P12525 358 aaPredicted RBP13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 NCF1P14598 390 aaPredicted RBP13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 VCLP18206 1134 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 MPSTP25325 297 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 EEF1DP29692 281 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 MAT2AP31153 395 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 ACSL1P33121 698 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 TRIM23P36406 574 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 CXCL12P48061 93 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 HK3P52790 923 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 ARFIP2P53365 341 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 PLOD1Q02809 727 aaPredicted RBP13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 GALNT1Q10472 559 aaPredicted RBP13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 INPP5AQ14642 412 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 SETDB1Q15047 1291 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 PPP1R3AQ16821 1122 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 UNC50Q53HI1 259 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 ANKS6Q68DC2 871 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 CRTC3Q6UUV7 619 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 LRRTM4Q86VH4 590 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 PDPRQ8NCN5 879 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 RFWD2Q8NHY2 731 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 HM13Q8TCT9 377 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 C1QTNF3Q9BXJ4 246 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 TMEM120AQ9BXJ8 343 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 GSTO2Q9H4Y5 243 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 STN1Q9H668 368 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 RDH14Q9HBH5 336 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 CD93Q9NPY3 652 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 KCNK4Q9NYG8 393 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 UTP6Q9NYH9 597 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 FAM8A1Q9UBU6 413 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 EBF1Q9UH73 591 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 HAO1Q9UJM8 370 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 DCTN4Q9UJW0 460 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 ADAMTS6Q9UKP5 1117 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 ANGPTL2Q9UKU9 493 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 CDYLQ9Y232 598 aa13.56□□□□□ -0.24
PDLIM5-203ENST00000359265 C17orf113A0A1B0GUU1 675 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 SLC5A10A0PJK1 596 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 KLHL33A6NCF5 533 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 SLCO1B7G3V0H7 640 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 CACNB4O00305 520 aaPredicted RBP13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 CHUKO15111 745 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 SLC31A1O15431 190 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 RPS17P08708 135 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 CYP2A7P20853 494 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 RPL14P50914 215 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 CDKL4Q5MAI5 379 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 SULT1C3Q6IMI6 304 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 FOXR1Q6PIV2 292 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 UBE2R2Q712K3 238 aaPredicted RBP13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 VRK3Q8IV63 474 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 SLC22A15Q8IZD6 547 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 LSMEM2Q8N112 164 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 ZNF781Q8N8C0 355 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 FOXJ1Q92949 421 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 EGFL8Q99944 293 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 WWP1Q9H0M0 922 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 RMI1Q9H9A7 625 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 COG4Q9H9E3 785 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 ACSS2Q9NR19 701 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 PNPOQ9NVS9 261 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 WWOXQ9NZC7 414 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 TMEM98Q9Y2Y6 226 aa13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 TNPO3Q9Y5L0 923 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 DNMT3AQ9Y6K1 912 aaPredicted RBP13.55□□□□□ -0.24
PDLIM5-203ENST00000359265 MGAT4DA6NG13 374 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 TMEM202A6NGA9 273 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 FPGTO14772 594 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 POP7O75817 140 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 DCTN3O75935 186 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 SIX3O95343 332 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 CATP04040 527 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 PROS1P07225 676 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 ANXA5P08758 320 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 HIST1H2AGP0C0S8 130 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 ALOX15P16050 662 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 HIST1H2ADP20671 130 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 HNRNPA2B1P22626 353 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 CD6P30203 668 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 AKT2P31751 481 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 NUDT1P36639 197 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 CCR10P46092 362 aa13.54□□□□□ -0.24
PDLIM5-203ENST00000359265 AQP5P55064 265 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms