RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 HEPACAMQ14CZ8 416 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 TMEM132BQ14DG7 1078 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 ANKDD1AQ495B1 522 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 ANKRD46Q86W74 232 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 ZNF567Q8N184 647 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 ARMC10Q8N2F6 343 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 TSEN15Q8WW01 171 aaKnown RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 IFT46Q9NQC8 304 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 CHRAC1Q9NRG0 131 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 ISM1B1AKI9 464 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 NPPAP01160 153 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 LRG1P02750 347 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 PGDP52209 483 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 TSPAN5P62079 268 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 PRAMEF17Q5VTA0 474 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 KIAA1614Q5VZ46 1190 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 LRRC69Q6ZNQ3 347 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 PHTF2Q8N3S3 785 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 RAD51AP1Q96B01 352 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 ATP13A3Q9H7F0 1226 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 TAS2R3Q9NYW6 316 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 A8MV72 311 aaPredicted RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 MFSD11O43934 449 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 OR2B3O76000 313 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 PRKACBP22694 351 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 TCEA1P23193 301 aaKnown RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 CLCA4Q14CN2 919 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 WDR45BQ5MNZ6 344 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 TMEM198Q66K66 360 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 SLC30A10Q6XR72 485 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 FBXO16Q8IX29 292 aaPredicted RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 FSTL5Q8N475 847 aaPredicted RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 GPRC5AQ8NFJ5 357 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 OR10H4Q8NGA5 316 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 SPACA7Q96KW9 195 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 BRD9Q9H8M2 597 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 FXYD6-FXYD2A0A087WZ82 144 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 SLC15A5A6NIM6 579 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 STK16O75716 305 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 RPP40O75818 363 aaKnown RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 BAG6P46379 1132 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 CDKL4Q5MAI5 379 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 NOL9Q5SY16 702 aaKnown RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 MBLAC2Q68D91 279 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 DOK6Q6PKX4 331 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 SMG7Q92540 1137 aaKnown RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 ART5Q96L15 291 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 FXYD6Q9H0Q3 95 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 DDX4Q9NQI0 724 aaKnown RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 CNOT11Q9UKZ1 510 aaKnown RBP8.64□□□□□ -1.03
COL6A6-201ENST00000358511 PRKAB1Q9Y478 270 aa8.64□□□□□ -1.03
COL6A6-201ENST00000358511 MEIS2O14770 477 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 ENTPD6O75354 484 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 ANXA8P13928 327 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 OAZ1P54368 228 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 FUT2Q10981 343 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 KLF1Q13351 362 aaPredicted RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 GRB14Q14449 540 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 LIX1Q8N485 282 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 SNX33Q8WV41 574 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 PFDN5Q99471 154 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 SLC39A3Q9BRY0 314 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 RC3H2Q9HBD1 1191 aaKnown RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 EBF1Q9UH73 591 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 MEGF6O75095 1541 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 WNT3AP56704 352 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 RAB5BP61020 215 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 VGLL2Q8N8G2 317 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 COL26A1Q96A83 441 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 MAELQ96JY0 434 aaKnown RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 COLEC11Q9BWP8 271 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 RBM7Q9Y580 266 aaKnown RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 L7N2F9 121 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 ITGA10O75578 1167 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 XYLT1Q86Y38 959 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 REPS2Q8NFH8 660 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 VANGL1Q8TAA9 524 aaPredicted RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 WACQ9BTA9 647 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 ABCG8Q9H221 673 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 ELL3Q9HB65 397 aaPredicted RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 FGBP02675 491 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 MPP2Q14168 576 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 RHEBQ15382 184 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 PAN2Q504Q3 1202 aaKnown RBP8.63□□□□□ -1.03
COL6A6-201ENST00000358511 LHFPL3Q86UP9 236 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 C12orf29Q8N999 325 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 NAT8LQ8N9F0 302 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 STOML3Q8TAV4 291 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 TCEAL4Q96EI5 215 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 ULBP1Q9BZM6 244 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 TREM1Q9NP99 234 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 ZIM2Q9NZV7 527 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 MAP4K5Q9Y4K4 846 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 PPEF2O14830 753 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 RECQL4O94761 1208 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 CASP7P55210 303 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 RELAQ04206 551 aa8.63□□□□□ -1.03
COL6A6-201ENST00000358511 GBE1Q04446 702 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms