RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 PLD3Q8IV08 490 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 PARP16Q8N5Y8 322 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 PROX1Q92786 737 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 SLC38A4Q969I6 547 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 CATSPERBQ9H7T0 1116 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 CSNK1G1Q9HCP0 422 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 DOCK4Q8N1I0 1966 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 TRBV5-3A0A0A0MS03 114 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 SUPT3HB4E1H0 165 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 CXCR6O00574 342 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 GPR32O75388 356 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 G6PDP11413 515 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 SEPHS1P49903 392 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 GZMMP51124 257 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 KRR1Q13601 381 aaKnown RBP11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 DGCR6Q14129 220 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 SIRPB2Q5JXA9 342 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 CYP20A1Q6UW02 462 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 SCIMPQ6UWF3 145 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 TAS2R42Q7RTR8 314 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 CALHM3Q86XJ0 350 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 FAM126BQ8IXS8 530 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 NUDT8Q8WV74 236 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 GTF2H4Q92759 462 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 POP5Q969H6 163 aaKnown RBP11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 PCED1BQ96HM7 432 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 ZNF382Q96SR6 550 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 GAD1Q99259 594 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 CDADC1Q9BWV3 514 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 CEP44Q9C0F1 390 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 ZBTB20Q9HC78 741 aaPredicted RBP11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 CCDC177Q9NQR7 707 aaPredicted RBP11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 QPCTLQ9NXS2 382 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 SLC25A37Q9NYZ2 338 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 RNF112Q9ULX5 631 aa11.9□□□□□ -0.5
SMARCAL1-201ENST00000357276 ELOVL7A1L3X0 281 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 WASH4PA8MWX3 477 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 H0Y626 953 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 E2F3O00716 465 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 GNGT2O14610 69 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 CD3EAPO15446 510 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 TRIM16O95361 564 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 PARNO95453 639 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 FADS2O95864 444 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 CHRNB1P11230 501 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 MSH3P20585 1137 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 OGNP20774 298 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 AGTR2P50052 363 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 CYP4F3Q08477 520 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 PPP1R8Q12972 351 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 AAK1Q2M2I8 961 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 GIPC2Q8TF65 315 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 TBATAQ96M53 351 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 CDK5RAP1Q96SZ6 601 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 SCN3BQ9NY72 215 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 FNIP2Q9P278 1114 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 NOTOA8MTQ0 251 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 IDH3BO43837 385 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 SEC22BO75396 215 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 CCNKO75909 580 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 ALX3O95076 343 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 IGFBP5P24593 272 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 LIPAP38571 399 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 HTR3AP46098 478 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 DGKQP52824 942 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 MAD2L1BPQ15013 274 aaPredicted RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 PCBP1Q15365 356 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 BRMS1LQ5PSV4 323 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 ATAD3CQ5T2N8 411 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 NLGN4XQ8N0W4 816 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 OR10A6Q8NH74 314 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 IPCEF1Q8WWN9 437 aaPredicted RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 SYTL2Q9HCH5 934 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 CCDC59Q9P031 241 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 TBC1D14Q9P2M4 693 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 AASSQ9UDR5 926 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 ORC6Q9Y5N6 252 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 PTCH2Q9Y6C5 1203 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 GLP2RO95838 553 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 PRKCAP17252 672 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 IGFBP6P24592 240 aaPredicted RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 HOXA9P31269 272 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 CD86P42081 329 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 MAGEA11P43364 429 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 PPP3CCP48454 512 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 DAPP51397 102 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 STC1P52823 247 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 NRG1Q02297 640 aaPredicted RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 TRAF3Q13114 568 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 MFSD10Q14728 455 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 TSNQ15631 228 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 RUNDC3AQ59EK9 446 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 FBXO48Q5FWF7 155 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 PAQR3Q6TCH7 311 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 RNF19BQ6ZMZ0 732 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 GPRIN3Q6ZVF9 776 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 CCDC71Q8IV32 467 aaPredicted RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 RAVER1Q8IY67 606 aaKnown RBP11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 UBQLNLQ8IYU4 475 aa11.89□□□□□ -0.51
SMARCAL1-201ENST00000357276 RTL3Q8N8U3 475 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms