RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 ASAH1Q13510 395 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 LRIT3Q3SXY7 679 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 SYVN1Q86TM6 617 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 LILRA2Q8N149 483 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 ZNF382Q96SR6 550 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 NIFKQ9BYG3 293 aaKnown RBP6.48□□□□□ -1.37
TRIM38-201ENST00000357085 DTLQ9NZJ0 730 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 TCAF1Q9Y4C2 921 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 IRAK3Q9Y616 596 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 RALGAPA2Q2PPJ7 1873 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 CXorf49A8MYA2 514 aaPredicted RBP6.48□□□□□ -1.37
TRIM38-201ENST00000357085 PSMB4P28070 264 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 UQCRC1P31930 480 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 TWIST2Q8WVJ9 160 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 KCTD7Q96MP8 289 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 CSPG4P5Q96PW8 444 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 TMEM209Q96SK2 561 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 PIF1Q9H611 641 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 AHSPQ9NZD4 102 aa6.48□□□□□ -1.37
TRIM38-201ENST00000357085 CLIC3O95833 236 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 DGKAP23743 735 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 SCAPQ12770 1279 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 PON2Q15165 354 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 RALGPS2Q86X27 583 aaPredicted RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 DPF3Q92784 378 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 TRNT1Q96Q11 434 aaKnown RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 TSEN34Q9BSV6 310 aaKnown RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 GABARAPL1Q9H0R8 117 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 SLC9A8Q9Y2E8 581 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 NAP1L6A6NFF2 107 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 TISP43B9A030 160 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 C9P02748 559 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 ODC1P11926 461 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 CKMT1AP12532 417 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 BMP4P12644 408 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 HNRNPLP14866 589 aaKnown RBP eCLIP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 AZGP1P25311 298 aaKnown RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 SRSF11Q05519 484 aaKnown RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 TCP10Q12799 353 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 TARDBPQ13148 414 aaKnown RBP eCLIP6.47□□□□□ -1.378e-6■■■□□ 18.9
TRIM38-201ENST00000357085 CLEC14AQ86T13 490 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 CAND1Q86VP6 1230 aaKnown RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 RAB42Q8N4Z0 105 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 LSMEM1Q8N8F7 131 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 DEDD2Q8WXF8 326 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 TRIB2Q92519 343 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 TCEAL3Q969E4 200 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 CXorf40BQ96DE9 158 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 KIF12Q96FN5 646 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 SIGLEC10Q96LC7 697 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 UCK2Q9BZX2 261 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 COL20A1Q9P218 1284 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 PIKFYVEQ9Y2I7 2098 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 PER2O15055 1255 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 BTBD8Q5XKL5 378 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 TMEM17Q86X19 198 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 IGDCC3Q8IVU1 814 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 CHAC2Q8WUX2 184 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 C12orf66Q96MD2 445 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 DPYSL5Q9BPU6 564 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 SLC7A5P2Q9GIP4 190 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 PCDHGB2Q9Y5G2 931 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 TAF1P21675 1872 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 DOCK1Q14185 1865 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 KERAO60938 352 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 SLC2A2P11168 524 aaPredicted RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 HLA-DMAP28067 261 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 ADAM15Q13444 863 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 RCAN2Q14206 197 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 SLC22A10Q63ZE4 541 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 ANKS3Q6ZW76 656 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 SLC43A3Q8NBI5 491 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 SLC39A13Q96H72 371 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 MUS81Q96NY9 551 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 SNRNP25Q9BV90 132 aaKnown RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 NANOGQ9H9S0 305 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 AKIP1Q9NQ31 210 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 CNOT2Q9NZN8 540 aaKnown RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 H2AFY2Q9P0M6 372 aaPredicted RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 UPB1Q9UBR1 384 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 POLR1CO15160 346 aaPredicted RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 KHDRBS3O75525 346 aaKnown RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 GSK3BP49841 420 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 NPTX1Q15818 432 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 VPS26BQ4G0F5 336 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 ESCO2Q56NI9 601 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 GPSM1Q86YR5 675 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 Q8N9G6 341 aaPredicted RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 AGBL3Q8NEM8 1001 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 TMBIM1Q969X1 311 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 TCEAL4Q96EI5 215 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 EPYCQ99645 322 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 MRI1Q9BV20 369 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 NAA50Q9GZZ1 169 aaKnown RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 PXMP2Q9NR77 195 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 SPASTQ9UBP0 616 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 FBXO5Q9UKT4 447 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 PCDHGA7Q9Y5G6 932 aa6.47□□□□□ -1.37
TRIM38-201ENST00000357085 NUP214P35658 2090 aaPredicted RBP6.47□□□□□ -1.37
TRIM38-201ENST00000357085 A8MV72 311 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms