RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 KELP23276 732 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 FMO3P31513 532 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 SLC6A4P31645 630 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 DAOAP59103 153 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 MVKQ03426 396 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 HEPACAMQ14CZ8 416 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 NPTX1Q15818 432 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 ZNF613Q6PF04 617 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 KIAA1324Q6UXG2 1013 aaKnown RBP14.62□□□□□ -0.07
CHD4-201ENST00000357008 TRIM74Q86UV6 250 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 TRIM73Q86UV7 250 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 TMEM59LQ9UK28 342 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 PCDHGC4Q9Y5F7 938 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 ITM2AO43736 263 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 IRF9Q00978 393 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 PRR23BQ6ZRT6 265 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 UBE2J2Q8N2K1 259 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 LRRC58Q96CX6 371 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 GPER1Q99527 375 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 A0A1B0GVM2 712 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 TCAF2A6NFQ2 919 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 GIMD1P0DJR0 217 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 TAF1AQ15573 450 aaPredicted RBP14.62□□□□□ -0.07
CHD4-201ENST00000357008 DCAF12L1Q5VU92 463 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 MPP5Q8N3R9 675 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 TP53INP1Q96A56 240 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 DPEP3Q9H4B8 488 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 MARCH7Q9H992 704 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 TVP23BQ9NYZ1 205 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 CFAP97Q9P2B7 532 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 AASSQ9UDR5 926 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 FKBPLQ9UIM3 349 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 MID1O15344 667 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 DNTTP04053 509 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 GSTT2BP0CG30 244 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 PRR5P85299 388 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 DNAJB7Q7Z6W7 309 aaPredicted RBP14.62□□□□□ -0.07
CHD4-201ENST00000357008 TMEM192Q8IY95 271 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 ATAD1Q8NBU5 361 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 TMEM209Q96SK2 561 aa14.62□□□□□ -0.07
CHD4-201ENST00000357008 PHPT1Q9NRX4 125 aaPredicted RBP14.62□□□□□ -0.07
CHD4-201ENST00000357008 ARPC2O15144 300 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 BNIP3Q12983 259 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 RANBP3LQ86VV4 465 aaPredicted RBP14.61□□□□□ -0.07
CHD4-201ENST00000357008 NEK7Q8TDX7 302 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 FCRL5Q96RD9 977 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 NTPCRQ9BSD7 190 aaKnown RBP14.61□□□□□ -0.07
CHD4-201ENST00000357008 PRKAB1Q9Y478 270 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 PITPNM1O00562 1244 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 PRKAR2AP13861 404 aaKnown RBP14.61□□□□□ -0.07
CHD4-201ENST00000357008 SLITRK4Q8IW52 837 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 SLC30A8Q8IWU4 369 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 KAT2AQ92830 837 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 HIPK3Q9H422 1215 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 SMURF2Q9HAU4 748 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 COMMD3Q9UBI1 195 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 ZNF536O15090 1300 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 H3BSA7 217 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 KLF1Q13351 362 aaPredicted RBP14.61□□□□□ -0.07
CHD4-201ENST00000357008 DGKZQ13574 1117 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 COLEC12Q5KU26 742 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 PHYKPLQ8IUZ5 450 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 CRELD1Q96HD1 420 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 FAM159BA6NKW6 160 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 NEDD8-MDP1E9PL57 170 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 ACOX3O15254 700 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 ZNF432O94892 652 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 ADH1CP00326 375 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 OR4Q2P0C623 313 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 PPM1AP35813 382 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 NOL9Q5SY16 702 aaKnown RBP14.61□□□□□ -0.07
CHD4-201ENST00000357008 CLIP4Q8N3C7 705 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 CMASQ8NFW8 434 aaPredicted RBP14.61□□□□□ -0.07
CHD4-201ENST00000357008 PCED1BQ96HM7 432 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 MGME1Q9BQP7 344 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 DUSP26Q9BV47 211 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 ZNF358Q9NW07 568 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 PSKH1P11801 424 aa14.61□□□□□ -0.07
CHD4-201ENST00000357008 AJAP1Q9UKB5 411 aaPredicted RBP14.61□□□□□ -0.07
CHD4-201ENST00000357008 PAPSS2O95340 614 aaPredicted RBP14.6□□□□□ -0.07
CHD4-201ENST00000357008 MMP3P08254 477 aa14.6□□□□□ -0.07
CHD4-201ENST00000357008 DCDC1P59894 354 aa14.6□□□□□ -0.07
CHD4-201ENST00000357008 OR7D4Q8NG98 312 aa14.6□□□□□ -0.07
CHD4-201ENST00000357008 ESAMQ96AP7 390 aa14.6□□□□□ -0.07
CHD4-201ENST00000357008 LRRC42Q9Y546 428 aa14.6□□□□□ -0.07
CHD4-201ENST00000357008 BCL9LQ86UU0 1499 aa14.6□□□□□ -0.07
CHD4-201ENST00000357008 CPSF4LA6NMK7 179 aaKnown RBP14.6□□□□□ -0.07
CHD4-201ENST00000357008 MYCLP1P12525 358 aaPredicted RBP14.6□□□□□ -0.07
CHD4-201ENST00000357008 DNAJA1P31689 397 aaKnown RBP14.6□□□□□ -0.07
CHD4-201ENST00000357008 LINGO4Q6UY18 593 aa14.6□□□□□ -0.07
CHD4-201ENST00000357008 SNX20Q7Z614 316 aa14.6□□□□□ -0.07
CHD4-201ENST00000357008 CADM2Q8N3J6 435 aa14.6□□□□□ -0.07
CHD4-201ENST00000357008 OR4C6Q8NH72 309 aa14.6□□□□□ -0.07
CHD4-201ENST00000357008 STON2Q8WXE9 905 aa14.6□□□□□ -0.07
CHD4-201ENST00000357008 PSMG2Q969U7 264 aa14.6□□□□□ -0.07
CHD4-201ENST00000357008 OR52B2Q96RD2 323 aa14.6□□□□□ -0.07
CHD4-201ENST00000357008 POLR2J3Q9H1A7 115 aaKnown RBP14.6□□□□□ -0.07
CHD4-201ENST00000357008 PTBP2Q9UKA9 531 aaKnown RBP14.6□□□□□ -0.07
CHD4-201ENST00000357008 PHC1P78364 1004 aa14.6□□□□□ -0.07
CHD4-201ENST00000357008 FOXM1Q08050 763 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms