RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 UBE2IP63279 158 aaKnown RBP15.18■□□□□ 0.02
TRIM13-201ENST00000356017 TIAL1Q01085 375 aaKnown RBP eCLIP15.18■□□□□ 0.02
TRIM13-201ENST00000356017 TRIP6Q15654 476 aaKnown RBP15.18■□□□□ 0.02
TRIM13-201ENST00000356017 RSPO4Q2I0M5 234 aaPredicted RBP15.18■□□□□ 0.02
TRIM13-201ENST00000356017 ADGRD1Q6QNK2 874 aa15.18■□□□□ 0.02
TRIM13-201ENST00000356017 GLRX5Q86SX6 157 aa15.18■□□□□ 0.02
TRIM13-201ENST00000356017 VRK3Q8IV63 474 aa15.18■□□□□ 0.02
TRIM13-201ENST00000356017 SFTPA2Q8IWL1 248 aa15.18■□□□□ 0.02
TRIM13-201ENST00000356017 GIMAP7Q8NHV1 300 aa15.18■□□□□ 0.02
TRIM13-201ENST00000356017 HNRNPLLQ8WVV9 542 aaKnown RBP15.18■□□□□ 0.02
TRIM13-201ENST00000356017 SLC30A3Q99726 388 aa15.18■□□□□ 0.02
TRIM13-201ENST00000356017 MVB12BQ9H7P6 319 aa15.18■□□□□ 0.02
TRIM13-201ENST00000356017 SLC40A1Q9NP59 571 aa15.18■□□□□ 0.02
TRIM13-201ENST00000356017 ASF1AQ9Y294 204 aa15.18■□□□□ 0.02
TRIM13-201ENST00000356017 U3KQA8 63 aa15.18■□□□□ 0.02
TRIM13-201ENST00000356017 PTPRZ1P23471 2315 aaPredicted RBP15.18■□□□□ 0.02
TRIM13-201ENST00000356017 COL5A1P20908 1838 aaPredicted RBP15.18■□□□□ 0.02
TRIM13-201ENST00000356017 WDR87Q6ZQQ6 2873 aa15.18■□□□□ 0.02
TRIM13-201ENST00000356017 GP1BAP07359 652 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 CRABP2P29373 138 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 ACSBG2Q5FVE4 666 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.17■□□□□ 0.02
TRIM13-201ENST00000356017 MROH9Q5TGP6 573 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 PAQR3Q6TCH7 311 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 UNC5DQ6UXZ4 953 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 CCDC91Q7Z6B0 441 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 PIM3Q86V86 326 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 CPNE9Q8IYJ1 553 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 NKAPQ8N5F7 415 aaKnown RBP15.17■□□□□ 0.02
TRIM13-201ENST00000356017 ACVR1CQ8NER5 493 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 DEFB124Q8NES8 71 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 DCAKDQ8WVC6 231 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 MTBPQ96DY7 904 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 UCK1Q9HA47 277 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 GPAMQ9HCL2 828 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 GVINP1Q7Z2Y8 2422 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 PIKFYVEQ9Y2I7 2098 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 ZNF292O60281 2723 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 CPED1A4D0V7 1026 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 KDM1AO60341 852 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 TCEA3O75764 348 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 SNRPAP09012 282 aaKnown RBP15.17■□□□□ 0.02
TRIM13-201ENST00000356017 MPC1LP0DKB6 136 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 ZNF37AP17032 561 aaPredicted RBP15.17■□□□□ 0.02
TRIM13-201ENST00000356017 GPR3P46089 330 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 RAB10P61026 200 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 IFFO1Q0D2I5 559 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 ABRQ12979 859 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 ILKQ13418 452 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 ZKSCAN8Q15776 578 aaPredicted RBP15.17■□□□□ 0.02
TRIM13-201ENST00000356017 TTC23LQ6PF05 361 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 CEP97Q8IW35 865 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 TBC1D21Q8IYX1 336 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 MYO1HQ8N1T3 1032 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 OR5K2Q8NHB8 316 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 MAGEC3Q8TD91 643 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 FERD3LQ96RJ6 166 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 SLC38A3Q99624 504 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 TRIT1Q9H3H1 467 aaKnown RBP15.17■□□□□ 0.02
TRIM13-201ENST00000356017 ARGLU1Q9NWB6 273 aaPredicted RBP15.17■□□□□ 0.02
TRIM13-201ENST00000356017 PSMC3IPQ9P2W1 217 aaPredicted RBP15.17■□□□□ 0.02
TRIM13-201ENST00000356017 POLG2Q9UHN1 485 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 CFAP20Q9Y6A4 193 aaKnown RBP15.17■□□□□ 0.02
TRIM13-201ENST00000356017 RNF215Q9Y6U7 377 aa15.17■□□□□ 0.02
TRIM13-201ENST00000356017 ASCC3Q8N3C0 2202 aaKnown RBP15.16■□□□□ 0.02
TRIM13-201ENST00000356017 IQANK1A0A1B0GTG1 560 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 PPM1DO15297 605 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 MATN4O95460 622 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 SHBGP04278 402 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 CDK4P11802 303 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 MYF5P13349 255 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 GCAP28676 217 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 CCNFP41002 786 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 SERPINB8P50452 374 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 DNAJC3Q13217 504 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 NR1D2Q14995 579 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 RASA2Q15283 850 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 GUSBP11Q6P575 273 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 TMEM26Q6ZUK4 368 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 RAPH1Q70E73 1250 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 EFL1Q7Z2Z2 1120 aaKnown RBP15.16■□□□□ 0.02
TRIM13-201ENST00000356017 ZNF438Q7Z4V0 828 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 TDRPQ86YL5 185 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 IFI44Q8TCB0 444 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 EEF1AKMT1Q8WVE0 214 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 ANKRD7Q92527 254 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 PDLIM5Q96HC4 596 aaKnown RBP15.16■□□□□ 0.02
TRIM13-201ENST00000356017 KIR3DX1Q9H7L2 352 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 CAB39LQ9H9S4 337 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 PCDHGA1Q9Y5H4 931 aa15.16■□□□□ 0.02
TRIM13-201ENST00000356017 HMX2A2RU54 273 aa15.15■□□□□ 0.02
TRIM13-201ENST00000356017 CDH16O75309 829 aa15.15■□□□□ 0.02
TRIM13-201ENST00000356017 TYK2P29597 1187 aa15.15■□□□□ 0.02
TRIM13-201ENST00000356017 SLC26A3P40879 764 aa15.15■□□□□ 0.02
TRIM13-201ENST00000356017 NOVA1P51513 510 aaKnown RBP15.15■□□□□ 0.02
TRIM13-201ENST00000356017 EPHA4P54764 986 aa15.15■□□□□ 0.02
TRIM13-201ENST00000356017 BMPR2Q13873 1038 aa15.15■□□□□ 0.02
TRIM13-201ENST00000356017 PHC3Q8NDX5 983 aa15.15■□□□□ 0.02
TRIM13-201ENST00000356017 CFAP61Q8NHU2 1237 aa15.15■□□□□ 0.02
TRIM13-201ENST00000356017 CCDC74AQ96AQ1 378 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms