RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 GALNT15Q8N3T1 639 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 PMEPA1Q969W9 287 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 KLF15Q9UIH9 416 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 PCDHGB5Q9Y5G0 923 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 A0A0G2JPF8 293 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 HNRNPCL3B7ZW38 293 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 AKAP8O43823 692 aaKnown RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 NPHS1O60500 1241 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 OR4F21O95013 312 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 STBD1O95210 358 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 GJB1P08034 283 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 HNRNPCL4P0DMR1 293 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 RBM34P42696 430 aaKnown RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 HEPACAMQ14CZ8 416 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 MAPK14Q16539 360 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 RAB11FIP2Q7L804 512 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 LRRC70Q7Z2Q7 622 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 SDR16C5Q8N3Y7 309 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 SIDT2Q8NBJ9 832 aaKnown RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 CEP76Q8TAP6 659 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 ZCCHC10Q8TBK6 192 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 LENG8Q96PV6 779 aaPredicted RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 TOR3AQ9H497 397 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 DEC1Q9P2X7 70 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 FBXO9Q9UK97 447 aaPredicted RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 PTPRJQ12913 1337 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 TLL1O43897 1013 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 NOBOXO60393 691 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 GOT2P00505 430 aaKnown RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 ALPPP05187 535 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 C8GP07360 202 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 MAP2K5Q13163 448 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 UGCGQ16739 394 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 LRRC69Q6ZNQ3 347 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 DNAJB7Q7Z6W7 309 aaPredicted RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 CAND1Q86VP6 1230 aaKnown RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 CERKQ8TCT0 537 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 AKAP1Q92667 903 aaKnown RBP eCLIP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 TESCQ96BS2 214 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 PURBQ96QR8 312 aaKnown RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 NUSAP1Q9BXS6 441 aaKnown RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 SLC22A4Q9H015 551 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 PCBD2Q9H0N5 130 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 ELOVL2Q9NXB9 296 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 MOCS1Q9NZB8 636 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 COMMD3Q9UBI1 195 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 ZNF282Q9UDV7 671 aaPredicted RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 RPL36Q9Y3U8 105 aaKnown RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 MAU2Q9Y6X3 613 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 EFCAB9A8MZ26 197 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 PPEF2O14830 753 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 B3GALT2O43825 422 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 PGLSO95336 258 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 ACSL1P33121 698 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 INTS6LQ5JSJ4 861 aaKnown RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 VSTM1Q6UX27 236 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 ZNF781Q8N8C0 355 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 COX18Q8N8Q8 333 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 FAM163AQ96GL9 167 aaPredicted RBP14.67□□□□□ -0.06
LMX1B-201ENST00000355497 FAM83DQ9H4H8 585 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 ABI3Q9P2A4 366 aa14.67□□□□□ -0.06
LMX1B-201ENST00000355497 CLCN7P51798 805 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 AP2S1P53680 142 aaPredicted RBP14.66□□□□□ -0.06
LMX1B-201ENST00000355497 TUSC3Q13454 348 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 FOXR2Q6PJQ5 311 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 KLHL36Q8N4N3 616 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 PLD5Q8N7P1 536 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 INO80EQ8NBZ0 244 aaPredicted RBP14.66□□□□□ -0.06
LMX1B-201ENST00000355497 GAL3ST1Q99999 423 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 HPF1Q9NWY4 346 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 PLK2Q9NYY3 685 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 HCN3Q9P1Z3 774 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 SALL3Q9BXA9 1300 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 PRORSD1PA6NEY8 169 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 NT5C1B-RDH14C9J2C7 533 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 RAP2AP10114 183 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 AVPR1BP47901 424 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 TARDBPQ13148 414 aaKnown RBP eCLIP14.66□□□□□ -0.06
LMX1B-201ENST00000355497 PRR23BQ6ZRT6 265 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 SYVN1Q86TM6 617 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 SERPINA9Q86WD7 417 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 NXPE2Q96DL1 559 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 TBATAQ96M53 351 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 PTPN18Q99952 460 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 DNAJB9Q9UBS3 223 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 USP32Q8NFA0 1604 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 CHD1O14646 1710 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 C9JVG2 144 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 AHCYP23526 432 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 VARSP26640 1264 aaKnown RBP14.66□□□□□ -0.06
LMX1B-201ENST00000355497 AQP4P55087 323 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 DEFA5Q01523 94 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 ADGRE1Q14246 886 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 DENND6BQ8NEG7 585 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 NSMCE3Q96MG7 304 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 PTTG2Q9NZH5 202 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 ERVW-1Q9UQF0 538 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 ZFP37Q9Y6Q3 630 aaPredicted RBP14.66□□□□□ -0.06
LMX1B-201ENST00000355497 LRRC72A6NJI9 287 aa14.66□□□□□ -0.06
LMX1B-201ENST00000355497 KDM4BO94953 1096 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms