RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 HIST1H2AJQ99878 128 aa15.26■□□□□ 0.03
CTSA-202ENST00000354880 H2AFJQ9BTM1 129 aa15.26■□□□□ 0.03
CTSA-202ENST00000354880 C1QTNF3Q9BXJ4 246 aa15.26■□□□□ 0.03
CTSA-202ENST00000354880 ILKAPQ9H0C8 392 aaPredicted RBP15.26■□□□□ 0.03
CTSA-202ENST00000354880 FGF22Q9HCT0 170 aa15.26■□□□□ 0.03
CTSA-202ENST00000354880 MRPL40Q9NQ50 206 aaKnown RBP15.26■□□□□ 0.03
CTSA-202ENST00000354880 MARCOQ9UEW3 520 aaPredicted RBP15.26■□□□□ 0.03
CTSA-202ENST00000354880 SUFUQ9UMX1 484 aa15.26■□□□□ 0.03
CTSA-202ENST00000354880 RAP2CQ9Y3L5 183 aa15.26■□□□□ 0.03
CTSA-202ENST00000354880 A0A1W2PPC4 97 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 AXIN1O15169 862 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 PI15O43692 258 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 PSIP1O75475 530 aaKnown RBP15.25■□□□□ 0.03
CTSA-202ENST00000354880 ANXA5P08758 320 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 NAA20P61599 178 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 CDKL1Q00532 357 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 PRKAA1Q13131 559 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 PYCR3Q53H96 274 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 CDKL4Q5MAI5 379 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 SULT1C3Q6IMI6 304 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 FAM83HQ6ZRV2 1179 aaPredicted RBP15.25■□□□□ 0.03
CTSA-202ENST00000354880 ABI3BPQ7Z7G0 1075 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 WDR75Q8IWA0 830 aaKnown RBP15.25■□□□□ 0.03
CTSA-202ENST00000354880 MCOLN3Q8TDD5 553 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 SNX19Q92543 992 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 WDR92Q96MX6 357 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 TIMM29Q9BSF4 260 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 PCED1AQ9H1Q7 454 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 EML4Q9HC35 981 aaKnown RBP15.25■□□□□ 0.03
CTSA-202ENST00000354880 ARL15Q9NXU5 204 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 HAO1Q9UJM8 370 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 DCTN4Q9UJW0 460 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 PTBP2Q9UKA9 531 aaKnown RBP15.25■□□□□ 0.03
CTSA-202ENST00000354880 TNPO3Q9Y5L0 923 aaKnown RBP15.25■□□□□ 0.03
CTSA-202ENST00000354880 BDP1A6H8Y1 2624 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 DNAH14Q0VDD8 3507 aa15.25■□□□□ 0.03
CTSA-202ENST00000354880 ZFC3H1O60293 1989 aaKnown RBP15.24■□□□□ 0.03
CTSA-202ENST00000354880 PRSS38A1L453 326 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 CATP04040 527 aaKnown RBP15.24■□□□□ 0.03
CTSA-202ENST00000354880 RPS17P08708 135 aaKnown RBP15.24■□□□□ 0.03
CTSA-202ENST00000354880 ACP5P13686 325 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 MAP4P27816 1152 aaKnown RBP15.24■□□□□ 0.03
CTSA-202ENST00000354880 RABIFP47224 123 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 THOP1P52888 689 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 CDH13P55290 713 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 AP1S2P56377 157 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 DMPKQ09013 629 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 PCBP2Q15366 365 aaKnown RBP eCLIP15.24■□□□□ 0.033e-6■■■■□ 25.7
CTSA-202ENST00000354880 METRNLQ641Q3 311 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 ENPP7Q6UWV6 458 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 ANKS4BQ8N8V4 417 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 RFWD2Q8NHY2 731 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 ESAMQ96AP7 390 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 RHBDF1Q96CC6 855 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 SPACA7Q96KW9 195 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 SHCBP1LQ9BZQ2 653 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 OR52A5Q9H2C5 316 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 KLC4Q9NSK0 619 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 PNPOQ9NVS9 261 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 INVSQ9Y283 1065 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 GON4LQ3T8J9 2241 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 CACNA1IQ9P0X4 2223 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 USP34Q70CQ2 3546 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 TECTAO75443 2155 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 PLXND1Q9Y4D7 1925 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 A0A0G2JND7 137 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 MPSTP25325 297 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 GNPDA1P46926 289 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 USP39Q53GS9 565 aaKnown RBP15.24■□□□□ 0.03
CTSA-202ENST00000354880 TPRG1LQ5T0D9 272 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 MBOAT1Q6ZNC8 495 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 Q6ZSR6 202 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 CADM4Q8NFZ8 388 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 C10orf82Q8WW14 230 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 NSUN5Q96P11 429 aaKnown RBP15.24■□□□□ 0.03
CTSA-202ENST00000354880 CARS2Q9HA77 564 aaKnown RBP15.24■□□□□ 0.03
CTSA-202ENST00000354880 WWOXQ9NZC7 414 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 EIF2B4Q9UI10 523 aaKnown RBP15.24■□□□□ 0.03
CTSA-202ENST00000354880 ZDHHC2Q9UIJ5 367 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 PCTPQ9UKL6 214 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.24■□□□□ 0.03
CTSA-202ENST00000354880 ARL2BPQ9Y2Y0 163 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 GPSM3Q9Y4H4 160 aa15.24■□□□□ 0.03
CTSA-202ENST00000354880 METTL12A8MUP2 240 aa15.23■□□□□ 0.03
CTSA-202ENST00000354880 ARHGEF33A8MVX0 844 aa15.23■□□□□ 0.03
CTSA-202ENST00000354880 E2F3O00716 465 aa15.23■□□□□ 0.03
CTSA-202ENST00000354880 TNFRSF10CO14798 259 aa15.23■□□□□ 0.03
CTSA-202ENST00000354880 TAPBPO15533 448 aa15.23■□□□□ 0.03
CTSA-202ENST00000354880 KCNJ13O60928 360 aa15.23■□□□□ 0.03
CTSA-202ENST00000354880 AOC1P19801 751 aa15.23■□□□□ 0.03
CTSA-202ENST00000354880 ACADLP28330 430 aa15.23■□□□□ 0.03
CTSA-202ENST00000354880 RPL14P50914 215 aaKnown RBP15.23■□□□□ 0.03
CTSA-202ENST00000354880 CLCQ05315 142 aa15.23■□□□□ 0.03
CTSA-202ENST00000354880 C18orf21Q32NC0 220 aaPredicted RBP15.23■□□□□ 0.03
CTSA-202ENST00000354880 CUZD1Q86UP6 607 aa15.23■□□□□ 0.03
CTSA-202ENST00000354880 PDZD3Q86UT5 571 aa15.23■□□□□ 0.03
CTSA-202ENST00000354880 OR13H1Q8NG92 308 aa15.23■□□□□ 0.03
CTSA-202ENST00000354880 AGR3Q8TD06 166 aa15.23■□□□□ 0.03
CTSA-202ENST00000354880 ZNF483Q8TF39 744 aaPredicted RBP15.23■□□□□ 0.03
CTSA-202ENST00000354880 OR1E3Q8WZA6 343 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms