RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 KIFC1Q9BW19 673 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 ADNPQ9H2P0 1102 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 MRM3Q9HC36 420 aaKnown RBP9.95□□□□□ -0.82
SYNE1-203ENST00000354674 SCUBE2Q9NQ36 999 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 SLC24A2Q9UI40 661 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 CAB39Q9Y376 341 aaPredicted RBP9.95□□□□□ -0.82
SYNE1-203ENST00000354674 ANGPTL3Q9Y5C1 460 aa9.95□□□□□ -0.82
SYNE1-203ENST00000354674 ZNF839A8K0R7 811 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 SMAD6O43541 496 aaKnown RBP9.94□□□□□ -0.82
SYNE1-203ENST00000354674 RSL1D1O76021 490 aaKnown RBP9.94□□□□□ -0.82
SYNE1-203ENST00000354674 SERPINF2P08697 491 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 CBLP22681 906 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 IDH3AP50213 366 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 GPLD1P80108 840 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 SLC18A2Q05940 514 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 FASTKD1Q53R41 847 aaKnown RBP9.94□□□□□ -0.82
SYNE1-203ENST00000354674 CERCAMQ5T4B2 595 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 GLRX5Q86SX6 157 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 C12orf40Q86WS4 652 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 ANKRD13BQ86YJ7 626 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 HID1Q8IV36 788 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 CBR4Q8N4T8 237 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 DNAAF3Q8N9W5 541 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 OR5H6Q8NGV6 325 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 RMDN1Q96DB5 314 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 APOL2Q9BQE5 337 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 FSD1LQ9BXM9 530 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 MROQ9BYG7 248 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 SMOXQ9NWM0 555 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 PAQR5Q9NXK6 330 aaPredicted RBP9.94□□□□□ -0.82
SYNE1-203ENST00000354674 SLC8A2Q9UPR5 921 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 MYOFQ9NZM1 2061 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 IQANK1A0A1B0GTG1 560 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 PRR23AA6NEV1 266 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 CLDN25C9JDP6 229 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 ANHXE9PGG2 379 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 K7ERQ8 282 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 ARNTLO00327 626 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 AXIN1O15169 862 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 TBX1O43435 398 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 CCDC159P0C7I6 412 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 SRCP12931 536 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 ETV3P41162 512 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 CTSOP43234 321 aaPredicted RBP9.94□□□□□ -0.82
SYNE1-203ENST00000354674 CCR10P46092 362 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 GNG2P59768 71 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 CRADDP78560 199 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 GALK2Q01415 458 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 CDK18Q07002 472 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 AGAP9Q5VTM2 703 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 BNC2Q6ZN30 1099 aaPredicted RBP9.94□□□□□ -0.82
SYNE1-203ENST00000354674 ASCC1Q8N9N2 400 aaKnown RBP9.94□□□□□ -0.82
SYNE1-203ENST00000354674 MZB1Q8WU39 189 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 GLMNQ92990 594 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 SH3YL1Q96HL8 342 aaPredicted RBP9.94□□□□□ -0.82
SYNE1-203ENST00000354674 OR52B2Q96RD2 323 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 OLFM1Q99784 485 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 CCDC90BQ9GZT6 254 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 C1orf21Q9H246 121 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 TLK1Q9UKI8 766 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 FCF1Q9Y324 198 aaKnown RBP9.94□□□□□ -0.82
SYNE1-203ENST00000354674 C5orf42Q9H799 3197 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 MYLKQ15746 1914 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 MIA3Q5JRA6 1907 aa9.94□□□□□ -0.82
SYNE1-203ENST00000354674 FAM159BA6NKW6 160 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 ATP6V1G2-DDX39BF2Z307 99 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 PRLP01236 227 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 HLA-DPA1P20036 260 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 ELK4P28324 431 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 VAC14Q08AM6 782 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 ART3Q13508 389 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 SLC9B1Q4ZJI4 515 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 PCID2Q5JVF3 399 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 SIRPB2Q5JXA9 342 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 SPANXN3Q5MJ09 141 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 C6orf132Q5T0Z8 1188 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 FAM205BPQ63HN1 556 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 SULT1C3Q6IMI6 304 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 PARM1Q6UWI2 310 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 SLCO6A1Q86UG4 719 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 PLPP6Q8IY26 295 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 PIWIL2Q8TC59 973 aaKnown RBP9.93□□□□□ -0.82
SYNE1-203ENST00000354674 WFIKKN2Q8TEU8 576 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 FGF14Q92915 247 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 MRGPRX3Q96LB0 322 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 TDRD1Q9BXT4 1180 aaKnown RBP9.93□□□□□ -0.82
SYNE1-203ENST00000354674 RAD21L1Q9H4I0 556 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 ZNF358Q9NW07 568 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 TOR4AQ9NXH8 423 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 CRNNQ9UBG3 495 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-203ENST00000354674 MUC22E2RYF6 1773 aaPredicted RBP9.93□□□□□ -0.82
SYNE1-203ENST00000354674 PRRC2BQ5JSZ5 2229 aaKnown RBP9.93□□□□□ -0.82
SYNE1-203ENST00000354674 ZCWPW2A0A1B0GU75 182 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 E7ENX8 843 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 ERVH48-1M5A8F1 160 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 RAD51BO15315 384 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 FZD6O60353 706 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 ITGB6P18564 788 aa9.93□□□□□ -0.82
SYNE1-203ENST00000354674 GTF2E2P29084 291 aaKnown RBP9.93□□□□□ -0.82
SYNE1-203ENST00000354674 SLC1A6P48664 564 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms