RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 PLCD1P51178 756 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 GPC3P51654 580 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 BRWD1-AS2P59051 145 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TGFB2P61812 414 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 SGCGQ13326 291 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 C15orf59Q2T9L4 293 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 CTU2Q2VPK5 515 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 FAM135BQ49AJ0 1406 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TCTE1Q5JU00 501 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ISM2Q6H9L7 571 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 SIGLEC15Q6ZMC9 328 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 WDR88Q6ZMY6 472 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 C15orf39Q6ZRI6 1047 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 CUZD1Q86UP6 607 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 DNAJC10Q8IXB1 793 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 LCORLQ8N3X6 602 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TEX9Q8N6V9 391 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PCDH20Q8N6Y1 951 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 LMNTD1Q8N9Z9 388 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF570Q96NI8 536 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 SLITRK1Q96PX8 696 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 NUDCD1Q96RS6 583 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF577Q9BSK1 485 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 B3GNT4Q9C0J1 378 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ABCG8Q9H221 673 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PEAK1Q9H792 1746 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 IL1RAPL2Q9NP60 686 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 PALMDQ9NP74 551 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 SIRT3Q9NTG7 399 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 GAR1Q9NY12 217 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 KLHL9Q9P2J3 617 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 CDC14AQ9UNH5 594 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 STRAPQ9Y3F4 350 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 HYDINQ4G0P3 5121 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TNRC6CQ9HCJ0 1690 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 LRRC9Q6ZRR7 1453 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 DHX57Q6P158 1386 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 A0A096LPK6 155 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ELOVL7A1L3X0 281 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ZIC3O60481 467 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 NDUFS7O75251 213 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ABHD2P08910 425 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ARHGAP25P42331 645 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 CASP3P42574 277 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 GABRB2P47870 512 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ME1P48163 572 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TKTL1P51854 596 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 MELKQ14680 651 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF169Q14929 603 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 C2orf76Q3KRA6 126 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ANKDD1AQ495B1 522 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 SOWAHCQ53LP3 525 aaPredicted RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ABHD17BQ5VST6 288 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 OR6B2Q6IFH4 312 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TMPRSS11FQ6ZWK6 438 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF534Q76KX8 674 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 ARMCX2Q7L311 632 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 FIG4Q92562 907 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 SGCDQ92629 289 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TAF4BQ92750 862 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TCEANC2Q96MN5 208 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 OR6C1Q96RD1 312 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 EDEM2Q9BV94 578 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 C1orf21Q9H246 121 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 DNAJC17Q9NVM6 304 aaKnown RBP1.6□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM51Q9NW97 253 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 AP1M2Q9Y6Q5 423 aa1.6□□□□□ -2.15
BRCA1-202ENST00000354071 MYO16Q9Y6X6 1858 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 GRID2IPA4D2P6 1211 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 LRRC3CA6NJW4 275 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 KPNA7A9QM74 516 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 PRSS46E5RG02 174 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 H0YGN5 161 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 TMEM178BH3BS89 294 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 INO80B-WBP1J3KQ70 363 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SOCS6O14544 535 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 CPLX1O14810 134 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 AKR7A3O95154 331 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 DIRAS3O95661 229 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 PLGP00747 810 aaPredicted RBP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 HIST1H2ABP04908 130 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 VIMP08670 466 aaKnown RBP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SKILP12757 684 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SRCP12931 536 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 B4GALT1P15291 398 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 KRT4P19013 534 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 FUT1P19526 365 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 HIST1H2ADP20671 130 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 CHRNA3P32297 505 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 PTGER1P34995 402 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 ALDH7A1P49419 539 aaKnown RBP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SERPINH1P50454 418 aaKnown RBP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 ZNF81P51508 661 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 CLDN20P56880 219 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 PROK1P58294 105 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SLC26A5P58743 744 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 PMP22Q01453 160 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 DMPKQ09013 629 aa1.59□□□□□ -2.15
BRCA1-202ENST00000354071 RFTN1Q14699 578 aaPredicted RBP1.59□□□□□ -2.15
BRCA1-202ENST00000354071 SHBQ15464 509 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms