RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 CPNE9Q8IYJ1 553 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 ZNF614Q8N883 585 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 MOSPD2Q8NHP6 518 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 RBPMSQ93062 196 aaKnown RBP4.97□□□□□ -1.61
SKP1-202ENST00000353411 C3orf49Q96BT1 292 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 DNAJC19Q96DA6 116 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SLC29A1Q99808 456 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SLC6A17Q9H1V8 727 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 ANKEF1Q9NU02 776 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 TAS2R13Q9NYV9 303 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 NYAP2Q9P242 653 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 PCDHGB2Q9Y5G2 931 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 PI4KAP42356 2102 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 MN1Q10571 1320 aaPredicted RBP4.97□□□□□ -1.61
SKP1-202ENST00000353411 CDC7O00311 574 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 PCDHGA12O60330 932 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 HNRNPLP14866 589 aaKnown RBP eCLIP4.97□□□□□ -1.618e-9■□□□□ 9.2
SKP1-202ENST00000353411 IL7RP16871 459 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 RAB4AP20338 218 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 CHRNA5P30532 468 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 MNDAP41218 407 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 MXD1Q05195 221 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 FGL1Q08830 312 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 KIAA1614Q5VZ46 1190 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 HACD2Q6Y1H2 254 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SV2AQ7L0J3 742 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 PRSS48Q7RTY5 328 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 PSTKQ8IV42 348 aaKnown RBP4.97□□□□□ -1.61
SKP1-202ENST00000353411 FAM129BQ96TA1 746 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 ZNF670Q9BS34 389 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 ZYG11BQ9C0D3 744 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 CPVLQ9H3G5 476 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 TIGARQ9NQ88 270 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 OXSMQ9NWU1 459 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 RIMS3Q9UJD0 308 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 SETD1AO15047 1707 aaKnown RBP4.97□□□□□ -1.61
SKP1-202ENST00000353411 TRIOBPQ9H2D6 2365 aa4.97□□□□□ -1.61
SKP1-202ENST00000353411 MGAT4DA6NG13 374 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 F8VP50 259 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 GRID2O43424 1007 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 SEC22BO75396 215 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 UGT2B17O75795 530 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 C2P06681 752 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 CTBP2P56545 445 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 SPIBQ01892 262 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 SPCS2Q15005 226 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 BAK1Q16611 211 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 PTPN20Q4JDL3 420 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 ATP13A4Q4VNC1 1196 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 KHDRBS2Q5VWX1 349 aaKnown RBP4.96□□□□□ -1.61
SKP1-202ENST00000353411 KCNT2Q6UVM3 1135 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 KNDC1Q76NI1 1749 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 EEPD1Q7L9B9 569 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 DSG4Q86SJ6 1040 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 PSD4Q8NDX1 1056 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 TERB2Q8NHR7 220 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 RPLP0P6Q8NHW5 317 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 PTPRUQ92729 1446 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 CPB2Q96IY4 423 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 SCN2AQ99250 2005 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 ZNF350Q9GZX5 532 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 ZIM2Q9NZV7 527 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 ZNF69Q9UC07 566 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 SHROOM3Q8TF72 1996 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 TO15178 435 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 CYP2A7P20853 494 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 MIPP30301 263 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 MATKP42679 507 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 TRIM28Q13263 835 aaKnown RBP4.96□□□□□ -1.61
SKP1-202ENST00000353411 ZNF169Q14929 603 aaPredicted RBP4.96□□□□□ -1.61
SKP1-202ENST00000353411 TIGD3Q6B0B8 471 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 DNAJC14Q6Y2X3 702 aaPredicted RBP4.96□□□□□ -1.61
SKP1-202ENST00000353411 KDELC2Q7Z4H8 507 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 RFKQ969G6 155 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 IL1RAPQ9NPH3 570 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 NUDT15Q9NV35 164 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 ERVK13-1Q9NX77 482 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 ASB4Q9Y574 426 aa4.96□□□□□ -1.61
SKP1-202ENST00000353411 ASCC3Q8N3C0 2202 aaKnown RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 PRAMEF22A3QJZ6 481 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 SULT1C2O00338 296 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 MITFO75030 526 aaPredicted RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 FAM155BO75949 473 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 IFNA10P01566 189 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 IFNA4P05014 189 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ACOT2P49753 483 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 ATP4BP51164 291 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 PLK1P53350 603 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 YWHAZP63104 245 aaKnown RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 CHRNA2Q15822 529 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 METTL23Q86XA0 190 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 OR13F1Q8NGS4 319 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 OR4C6Q8NH72 309 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 CBWD1Q9BRT8 395 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 GATA5Q9BWX5 397 aaPredicted RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 NFKBIZQ9BYH8 718 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 POLR2J2Q9GZM3 115 aaKnown RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 ABCB8Q9NUT2 735 aa4.96□□□□□ -1.62
SKP1-202ENST00000353411 NUFIP1Q9UHK0 495 aaKnown RBP4.96□□□□□ -1.62
SKP1-202ENST00000353411 IRS2Q9Y4H2 1338 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms