RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 MRIQ9BWK5 157 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 BCL2L14Q9BZR8 327 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 DUSP21Q9H596 190 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 CYP4F12Q9HCS2 524 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 USE1Q9NZ43 259 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 UTS2RQ9UKP6 389 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 STON1Q9Y6Q2 735 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 BRCA1P38398 1863 aaKnown RBP10.48□□□□□ -0.73
CAPN3-203ENST00000349748 RBBP6Q7Z6E9 1792 aaKnown RBP10.48□□□□□ -0.73
CAPN3-203ENST00000349748 PTPRJQ12913 1337 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 BPTFQ12830 3046 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 F8W036 122 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 BCKDKO14874 412 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 SSX5O60225 188 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 MITFO75030 526 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-203ENST00000349748 PRSS23O95084 383 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 ALDH1A1P00352 501 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 ITGB3P05106 788 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 HMGN1P05114 100 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 HOXD8P13378 290 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-203ENST00000349748 TNFSF8P32971 234 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 GBX2P52951 348 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-203ENST00000349748 BCAR1P56945 870 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 OSTNP61366 133 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 PCDH1Q08174 1060 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 DSC1Q08554 894 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 SIM2Q14190 667 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-203ENST00000349748 TUSC1Q2TAM9 212 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 IER5Q5VY09 327 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 SYVN1Q86TM6 617 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 FAM86B1Q8N7N1 296 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 TXNDC5Q8NBS9 432 aaKnown RBP10.48□□□□□ -0.73
CAPN3-203ENST00000349748 NETO2Q8NC67 525 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 DCAF4Q8WV16 495 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 SLC5A11Q8WWX8 675 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 PHF21AQ96BD5 680 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 RTP4Q96DX8 246 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 MFSD14AQ96MC6 490 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 CHCHD6Q9BRQ6 235 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 TTLL2Q9BWV7 592 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 C11orf54Q9H0W9 315 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-203ENST00000349748 PCDHB16Q9NRJ7 776 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 HACL1Q9UJ83 578 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 GMPPBQ9Y5P6 360 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 ANKRD12Q6UB98 2062 aa10.48□□□□□ -0.73
CAPN3-203ENST00000349748 DICER1Q9UPY3 1922 aaKnown RBP10.47□□□□□ -0.73
CAPN3-203ENST00000349748 RAB19A4D1S5 217 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 RGS10O43665 173 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 ERN1O75460 977 aaKnown RBP10.47□□□□□ -0.73
CAPN3-203ENST00000349748 TRUB2O95900 331 aaKnown RBP10.47□□□□□ -0.73
CAPN3-203ENST00000349748 MPOP05164 745 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 ALPPP05187 535 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 PGAM1P18669 254 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 GPX3P22352 226 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 NRIP1P48552 1158 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 KCNK10P57789 538 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 MYL6P60660 151 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 S100A12P80511 92 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 GTF2BQ00403 316 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 ABRQ12979 859 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 CSTF3Q12996 717 aaKnown RBP10.47□□□□□ -0.73
CAPN3-203ENST00000349748 TATDN3Q17R31 274 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 AHSA2Q719I0 299 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 RASAL3Q86YV0 1011 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 MINDY1Q8N5J2 469 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 OR8K5Q8NH50 307 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 CLHC1Q8NHS4 586 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 SETD6Q8TBK2 473 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 UFD1Q92890 307 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 TMEM125Q96AQ2 219 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 ZCCHC4Q9H5U6 513 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 ASB7Q9H672 318 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 RNF121Q9H920 327 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 SLAMF7Q9NQ25 335 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 MCUBQ9NWR8 336 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 SLAMF8Q9P0V8 285 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-203ENST00000349748 KLHL21Q9UJP4 597 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 PCDHA9Q9Y5H5 950 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 KLF2Q9Y5W3 355 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-203ENST00000349748 PTGDR2Q9Y5Y4 395 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 GMDSO60547 372 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 PSMD10O75832 226 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 AHSGP02765 367 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 ZNF37AP17032 561 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-203ENST00000349748 RPL9P32969 192 aaKnown RBP10.47□□□□□ -0.73
CAPN3-203ENST00000349748 TRIM23P36406 574 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 CTSKP43235 329 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 CAPZA2P47755 286 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 OR4D2P58180 307 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 LTB4RQ15722 352 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 CDO1Q16878 200 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 ARMCX4Q5H9R4 360 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 FAM26DQ5JW98 314 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 SLC39A4Q6P5W5 647 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 VWA5B2Q8N398 1253 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 ASB15Q8WXK1 588 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 CIDECQ96AQ7 238 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-203ENST00000349748 TNIP3Q96KP6 325 aa10.47□□□□□ -0.73
CAPN3-203ENST00000349748 C3orf30Q96M34 536 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms