RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 EHD3Q9NZN3 535 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 ZIM2Q9NZV7 527 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 SLAMF8Q9P0V8 285 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 PCDHB14Q9Y5E9 798 aa10.16□□□□□ -0.78
CHRNA1-202ENST00000348749 YJEFN3A6XGL0 299 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 I6L893 689 aaPredicted RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 GNGT2O14610 69 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 DSCR3O14972 297 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 SLC7A4O43246 635 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 AIREO43918 545 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 BEST1O76090 585 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 LINC00032P0C843 101 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 ITGA2P17301 1181 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 POLR2CP19387 275 aaPredicted RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 EFNA1P20827 205 aaPredicted RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 CYP2A7P20853 494 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 MAGEA11P43364 429 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 RPS5P46782 204 aaKnown RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 OR3A3P47888 321 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 TUFMP49411 452 aaKnown RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 AP2S1P53680 142 aaPredicted RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 CDH13P55290 713 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 HUNKP57058 714 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 GPLD1P80108 840 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 BNC1Q01954 994 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 SUZ12Q15022 739 aaKnown RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 NKG7Q16617 165 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 NXNL2Q5VZ03 156 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 TWF2Q6IBS0 349 aaKnown RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 SYCE2Q6PIF2 218 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 OTOP3Q7RTS5 596 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 HIPK1Q86Z02 1210 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 FRS2Q8WU20 508 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 ANKRD49Q8WVL7 239 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 IPCEF1Q8WWN9 437 aaPredicted RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 SLC47A1Q96FL8 570 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 SYT17Q9BSW7 474 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 TKTL2Q9H0I9 626 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 NXF3Q9H4D5 531 aaKnown RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 PIF1Q9H611 641 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 ALG9Q9H6U8 611 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 CATSPERBQ9H7T0 1116 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 POPDC3Q9HBV1 291 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 TAS2R9Q9NYW1 312 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 UBP1Q9NZI7 540 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 MOSPD1Q9UJG1 213 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 NUDT5Q9UKK9 219 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 GJD2Q9UKL4 321 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 TRAPPC4Q9Y296 219 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 BOLA1Q9Y3E2 137 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 A0A0G2JMP0 313 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 UGT2B17O75795 530 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 GOT2P00505 430 aaKnown RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 HOXB6P17509 224 aaKnown RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 PPP3CCP48454 512 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 KCNC1P48547 511 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 UGT2B15P54855 530 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 MAP3K7CLP57077 242 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 UFM1P61960 85 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 TBRG1Q3YBR2 411 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 PARP15Q460N3 678 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 Q5BKY6 102 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 HECTD2Q5U5R9 776 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 LAIR1Q6GTX8 287 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 ENPP6Q6UWR7 440 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 DLEU7Q6UYE1 221 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 ZNF517Q6ZMY9 492 aaPredicted RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 RAB44Q7Z6P3 723 aaPredicted RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 ZFAND4Q86XD8 727 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 ABI1Q8IZP0 508 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 CADM2Q8N3J6 435 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 FAM86B1Q8N7N1 296 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 ZNF540Q8NDQ6 660 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 IPMKQ8NFU5 416 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 KBTBD8Q8NFY9 601 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 TRPM4Q8TD43 1214 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 GIPC2Q8TF65 315 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 PEX13Q92968 403 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 PYCR2Q96C36 320 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 TMCO6Q96DC7 493 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 ZFYVE19Q96K21 471 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 VPS35Q96QK1 796 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 SDHCQ99643 169 aaPredicted RBP10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 COQ7Q99807 217 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 APOL4Q9BPW4 351 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 FSD1LQ9BXM9 530 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 GABARAPL1Q9H0R8 117 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 MAGIXQ9H6Y5 334 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 ACTR8Q9H981 624 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 TXNRD2Q9NNW7 524 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 ITM2CQ9NQX7 267 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 SLC2A6Q9UGQ3 507 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 FBXO10Q9UK96 956 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 SPEF1Q9Y4P9 236 aa10.15□□□□□ -0.78
CHRNA1-202ENST00000348749 MIA3Q5JRA6 1907 aa10.14□□□□□ -0.79
CHRNA1-202ENST00000348749 H3BQ06 376 aaPredicted RBP10.14□□□□□ -0.79
CHRNA1-202ENST00000348749 ARNTLO00327 626 aa10.14□□□□□ -0.79
CHRNA1-202ENST00000348749 CLDN5O00501 218 aa10.14□□□□□ -0.79
CHRNA1-202ENST00000348749 SSX4O60224 188 aa10.14□□□□□ -0.79
CHRNA1-202ENST00000348749 MAFKO60675 156 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms