RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 PLXNB2O15031 1838 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 ALPK2Q86TB3 2170 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 LOC285095A0A1B0GVY8 99 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 TPST2O60704 377 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 XYLBO75191 536 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 SRCP12931 536 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 EPORP19235 508 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 OXTRP30559 389 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 GSTT1P30711 240 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 PPM1AP35813 382 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 IL5RAQ01344 420 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 OR4F3Q6IEY1 312 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 ERAP2Q6P179 960 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 NRTNQ99748 197 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 DPH2Q9BQC3 489 aaPredicted RBP13.06□□□□□ -0.32
CASC4-202ENST00000345795 TSEN34Q9BSV6 310 aaKnown RBP13.06□□□□□ -0.32
CASC4-202ENST00000345795 ADGRE2Q9UHX3 823 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 IFRD1O00458 451 aaPredicted RBP13.05□□□□□ -0.32
CASC4-202ENST00000345795 PITPNM1O00562 1244 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 RFXANKO14593 260 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 GRM6O15303 877 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 PAK4O96013 591 aaPredicted RBP13.05□□□□□ -0.32
CASC4-202ENST00000345795 EIF2S1P05198 315 aaKnown RBP13.05□□□□□ -0.32
CASC4-202ENST00000345795 CYP2A7P20853 494 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 FDXRP22570 491 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 SOX9P48436 509 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 GSK3BP49841 420 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 CYP4F3Q08477 520 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 IRF5Q13568 498 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 HKDC1Q2TB90 917 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 CTSL3PQ5NE16 218 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 LDLRAP1Q5SW96 308 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 BPIFB6Q8NFQ5 453 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 OR4K1Q8NGD4 311 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 SLC29A1Q99808 456 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 IL17CQ9P0M4 197 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 C5AR2Q9P296 337 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 ZNF451Q9Y4E5 1061 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 EYSQ5T1H1 3165 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 TRBC1P01850 177 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 FAM163BP0C2L3 166 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 CST5P28325 142 aaPredicted RBP13.05□□□□□ -0.32
CASC4-202ENST00000345795 ALDH4A1P30038 563 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 TIE1P35590 1138 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 CHN2P52757 468 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 TLR1Q15399 786 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 CRTC1Q6UUV9 634 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 OR2T12Q8NG77 320 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 UTP15Q8TED0 518 aaKnown RBP13.05□□□□□ -0.32
CASC4-202ENST00000345795 SGK2Q9HBY8 427 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 ANAPC2Q9UJX6 822 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 LCTP09848 1927 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 WDR81Q562E7 1941 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 MGAMO43451 1857 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.05□□□□□ -0.32
CASC4-202ENST00000345795 H3BM21 787 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 ERAL1O75616 437 aaKnown RBP13.05□□□□□ -0.32
CASC4-202ENST00000345795 ZNF189O75820 626 aaPredicted RBP13.05□□□□□ -0.32
CASC4-202ENST00000345795 GNPDA1P46926 289 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 POLD2P49005 469 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 RAP1GDS1P52306 607 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 MCCD1P59942 119 aaPredicted RBP13.05□□□□□ -0.32
CASC4-202ENST00000345795 POLR2LP62875 67 aaKnown RBP13.05□□□□□ -0.32
CASC4-202ENST00000345795 CAMK2GQ13555 558 aaPredicted RBP13.05□□□□□ -0.32
CASC4-202ENST00000345795 GRAMD4Q6IC98 578 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 GDPD4Q6W3E5 623 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 BNIPLQ7Z465 357 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 SNX20Q7Z614 316 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 DCAF4L2Q8NA75 395 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 KLF16Q9BXK1 252 aaPredicted RBP13.05□□□□□ -0.32
CASC4-202ENST00000345795 OR51B5Q9H339 312 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 TUBB1Q9H4B7 451 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 TRPC4Q9UBN4 977 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 LEF1Q9UJU2 399 aaPredicted RBP13.05□□□□□ -0.32
CASC4-202ENST00000345795 PADI4Q9UM07 663 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 PHF24Q9UPV7 400 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 CASP8AP2Q9UKL3 1982 aa13.05□□□□□ -0.32
CASC4-202ENST00000345795 PTPRFP10586 1907 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 TRIM43BA6NCK2 446 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 TMEM202A6NGA9 273 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 GLOD5A6NK44 160 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 FBP2O00757 339 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 CST1P01037 141 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 UROSP10746 265 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 OGNP20774 298 aaKnown RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 CD72P21854 359 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 HK3P52790 923 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 PLA2G16P53816 162 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 OR4D2P58180 307 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 ADNP2Q6IQ32 1131 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 HORMAD1Q86X24 394 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 VRK3Q8IV63 474 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 ZC3H7AQ8IWR0 971 aaKnown RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 RGL4Q8IZJ4 473 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 TRIM43Q96BQ3 446 aaPredicted RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 TFB2MQ9H5Q4 396 aaKnown RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 XKR8Q9H6D3 395 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 MIEF1Q9NQG6 463 aa13.04□□□□□ -0.32
CASC4-202ENST00000345795 INTS6Q9UL03 887 aaKnown RBP13.04□□□□□ -0.32
CASC4-202ENST00000345795 SH3GLB1Q9Y371 365 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms