RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 FOLR1P15328 257 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 POLR2CP19387 275 aaPredicted RBP14.03□□□□□ -0.16
HMGN3-202ENST00000344726 TPSB2P20231 275 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 MGAT1P26572 445 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 MAP4P27816 1152 aaKnown RBP14.03□□□□□ -0.16
HMGN3-202ENST00000344726 NDUFS1P28331 727 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 NMBRP28336 390 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 STAT5AP42229 794 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 CD151P48509 253 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 VPS41P49754 854 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 KPNA2P52292 529 aaKnown RBP14.03□□□□□ -0.16
HMGN3-202ENST00000344726 PRAMEP78395 509 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 NFKB2Q00653 900 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 RPA4Q13156 261 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 BOP1Q14137 746 aaKnown RBP14.03□□□□□ -0.16
HMGN3-202ENST00000344726 KCNJ11Q14654 390 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 BRD3Q15059 726 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 TPSAB1Q15661 275 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 DNTTIP2Q5QJE6 756 aaKnown RBP14.03□□□□□ -0.16
HMGN3-202ENST00000344726 ATP1A1-AS1Q5TC04 95 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 ANKRD22Q5VYY1 191 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 KLHL35Q6PF15 583 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 FBXO38Q6PIJ6 1188 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 OOSP2Q86WS3 158 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 ZSCAN1Q8NBB4 408 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 ACVR1CQ8NER5 493 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 OR52E1Q8NGJ3 308 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 LKAAEAR1Q8TD35 194 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 ELMO1Q92556 727 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 UBXN4Q92575 508 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 SGSM3Q96HU1 749 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 SLC45A3Q96JT2 553 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 PBKQ96KB5 322 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 SYBUQ9NX95 663 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 TRMT1Q9NXH9 659 aaKnown RBP14.03□□□□□ -0.16
HMGN3-202ENST00000344726 HEBP2Q9Y5Z4 205 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 FER1L5A0AVI2 2057 aa14.03□□□□□ -0.16
HMGN3-202ENST00000344726 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.02□□□□□ -0.17
HMGN3-202ENST00000344726 BHMG1C9JSJ3 638 aaPredicted RBP14.02□□□□□ -0.17
HMGN3-202ENST00000344726 QSOX1O00391 747 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 IFRD1O00458 451 aaPredicted RBP14.02□□□□□ -0.17
HMGN3-202ENST00000344726 BTN3A3O00478 584 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 TERTO14746 1132 aaKnown RBP14.02□□□□□ -0.17
HMGN3-202ENST00000344726 LIN7AO14910 233 aaPredicted RBP14.02□□□□□ -0.17
HMGN3-202ENST00000344726 AVILO75366 819 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 KIAA0754O94854 1291 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 KRT14P02533 472 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 FTH1P02794 183 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 GSTM1P09488 218 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 EBLN1P0CF75 366 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 FGF5P12034 268 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 ARNTP27540 789 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 ACADLP28330 430 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 OAS2P29728 719 aaKnown RBP14.02□□□□□ -0.17
HMGN3-202ENST00000344726 NPY2RP49146 381 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 GSTM4Q03013 218 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 ABHD18Q0P651 414 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 GPS1Q13098 491 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 PRKG2Q13237 762 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 KRT33BQ14525 404 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 CYP1B1Q16678 543 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 FASTKD1Q53R41 847 aaKnown RBP14.02□□□□□ -0.17
HMGN3-202ENST00000344726 LYPLAL1Q5VWZ2 237 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 LRRC8BQ6P9F7 803 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 CES3Q6UWW8 571 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 GALNT6Q8NCL4 622 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 OR5AR1Q8NGP9 310 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 TFGQ92734 400 aaPredicted RBP14.02□□□□□ -0.17
HMGN3-202ENST00000344726 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.02□□□□□ -0.17
HMGN3-202ENST00000344726 MAGOHBQ96A72 148 aaKnown RBP14.02□□□□□ -0.17
HMGN3-202ENST00000344726 MFSD3Q96ES6 412 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 OSBPL9Q96SU4 736 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 CD180Q99467 661 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 HGH1Q9BTY7 390 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 ULBP3Q9BZM4 244 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 IL22Q9GZX6 179 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 GPN2Q9H9Y4 310 aaPredicted RBP14.02□□□□□ -0.17
HMGN3-202ENST00000344726 CATSPERZQ9NTU4 200 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 NEU2Q9Y3R4 380 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 SPTA1P02549 2419 aa14.02□□□□□ -0.17
HMGN3-202ENST00000344726 UBA6A0AVT1 1052 aaPredicted RBP14.01□□□□□ -0.17
HMGN3-202ENST00000344726 USP27XA6NNY8 438 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 IQCF5A8MTL0 148 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 BTN3A1O00481 513 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 CD3EAPO15446 510 aaKnown RBP14.01□□□□□ -0.17
HMGN3-202ENST00000344726 SPAG6O75602 509 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 TMEM63AO94886 807 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 OR56A5P0C7T3 313 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 TPBGLP0DKB5 382 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 PRKAR1AP10644 381 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 CCR7P32248 378 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 COILP38432 576 aaPredicted RBP14.01□□□□□ -0.17
HMGN3-202ENST00000344726 MAGEA6P43360 314 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 CDK16Q00536 496 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 CDC20Q12834 499 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 NFATC3Q12968 1075 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 MAP7Q14244 749 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 IL11RAQ14626 422 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 RASGRP3Q8IV61 690 aa14.01□□□□□ -0.17
HMGN3-202ENST00000344726 VRK3Q8IV63 474 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms