RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 RPL9P32969 192 aaKnown RBP17.79■□□□□ 0.44
SMC4-201ENST00000344722 TSTQ16762 297 aaKnown RBP17.79■□□□□ 0.44
SMC4-201ENST00000344722 ZNF697Q5TEC3 545 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 TRAPPC5Q8IUR0 188 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 GOLM1Q8NBJ4 401 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 POLE4Q9NR33 117 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 NUP50Q9UKX7 468 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 TRPV2Q9Y5S1 764 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 KERAO60938 352 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 RFPL2O75678 378 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 CHRNA1P02708 482 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 RHOQP17081 205 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 DNAJB13P59910 316 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 DSC2Q02487 901 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 NFATC3Q12968 1075 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 ABRQ12979 859 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 SMCO1Q147U7 214 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 PDE12Q6L8Q7 609 aaKnown RBP17.79■□□□□ 0.44
SMC4-201ENST00000344722 SLC38A4Q969I6 547 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 EXOC2Q96KP1 924 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 TBC1D24Q9ULP9 559 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 PLCL2Q9UPR0 1127 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 E9PAM4 449 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 ITGB1P05556 798 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 MYF6P23409 242 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 STOMP27105 288 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 GABARAPL2P60520 117 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 PFKPQ01813 784 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 CATSPERGQ6ZRH7 1159 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 DAW1Q8N136 415 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 KCNC2Q96PR1 638 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 FCRL5Q96RD9 977 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 MND1Q9BWT6 205 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 GBA2Q9HCG7 927 aaPredicted RBP17.79■□□□□ 0.44
SMC4-201ENST00000344722 SMPD4Q9NXE4 827 aa17.79■□□□□ 0.44
SMC4-201ENST00000344722 SPIN1Q9Y657 262 aaPredicted RBP17.79■□□□□ 0.44
SMC4-201ENST00000344722 COL5A2P05997 1499 aaPredicted RBP17.79■□□□□ 0.44
SMC4-201ENST00000344722 DLGAP1O14490 977 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 ANXA4P09525 319 aaPredicted RBP17.78■□□□□ 0.44
SMC4-201ENST00000344722 SCNN1GP51170 649 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 EIF2B5Q13144 721 aaKnown RBP17.78■□□□□ 0.44
SMC4-201ENST00000344722 UBE2Q1Q7Z7E8 422 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 S100A13Q99584 98 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 ZDHHC6Q9H6R6 413 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 STOX2Q9P2F5 926 aaPredicted RBP17.78■□□□□ 0.44
SMC4-201ENST00000344722 UPB1Q9UBR1 384 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 MAP4K5Q9Y4K4 846 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 XPNPEP2O43895 674 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 CTPS1P17812 591 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 ITPKAP23677 461 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 DEFA5Q01523 94 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 HECTD3Q5T447 861 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 BEND5Q7L4P6 421 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 STX12Q86Y82 276 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 POMGNT2Q8NAT1 580 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 OR9I1Q8NGQ6 314 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 CIPCQ9C0C6 399 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 NECTIN3Q9NQS3 549 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 RDH8Q9NYR8 311 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 SPG21Q9NZD8 308 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 IGKV6D-41A0A0C4DH26 115 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 FOXD2O60548 495 aaPredicted RBP17.78■□□□□ 0.44
SMC4-201ENST00000344722 SNAP29O95721 258 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 ZNF806P0C7X5 589 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 IL7P13232 177 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 CEACAM7Q14002 265 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 SLC51AQ86UW1 340 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 SLC15A4Q8N697 577 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 NDRG1Q92597 394 aaKnown RBP17.78■□□□□ 0.44
SMC4-201ENST00000344722 HBEGFQ99075 208 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 NRCAMQ92823 1304 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 NME6O75414 186 aaPredicted RBP17.78■□□□□ 0.44
SMC4-201ENST00000344722 KDM4BO94953 1096 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 GJB1P08034 283 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 CSTF2P33240 577 aaKnown RBP eCLIP17.78■□□□□ 0.44
SMC4-201ENST00000344722 C6orf141Q5SZD1 244 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 FAM91A1Q658Y4 838 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 UGT2A3Q6UWM9 527 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 PYURFQ96I23 114 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 PIWIL1Q96J94 861 aaKnown RBP17.78■□□□□ 0.44
SMC4-201ENST00000344722 DPAGT1Q9H3H5 408 aa17.78■□□□□ 0.44
SMC4-201ENST00000344722 CCNDBP1O95273 360 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 CFHP08603 1231 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 CDK4P11802 303 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 VARSP26640 1264 aaKnown RBP17.77■□□□□ 0.44
SMC4-201ENST00000344722 OGDHQ02218 1023 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 BIKQ13323 160 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 BORAQ6PGQ7 559 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 FIBCD1Q8N539 461 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 FAM98AQ8NCA5 519 aaKnown RBP17.77■□□□□ 0.44
SMC4-201ENST00000344722 TSPEARQ8WU66 669 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 DDX1Q92499 740 aaKnown RBP17.77■□□□□ 0.44
SMC4-201ENST00000344722 CHIAQ9BZP6 476 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 RGS17Q9UGC6 210 aaPredicted RBP17.77■□□□□ 0.44
SMC4-201ENST00000344722 FBXW11Q9UKB1 542 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 TLX1P31314 330 aaPredicted RBP17.77■□□□□ 0.44
SMC4-201ENST00000344722 HOXD13P35453 343 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 PSEN2P49810 448 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 KIAA1614Q5VZ46 1190 aa17.77■□□□□ 0.44
SMC4-201ENST00000344722 CYP4V2Q6ZWL3 525 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms