RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ARHGEF33A8MVX0 844 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 UBDO15205 165 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 PRAMEF4O60810 478 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 MATN4O95460 622 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 KLF8O95600 359 aaPredicted RBP13.28□□□□□ -0.28
CDC42-202ENST00000344548 FTH1P02794 183 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 ITGAXP20702 1163 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 ARL1P40616 181 aaPredicted RBP13.28□□□□□ -0.28
CDC42-202ENST00000344548 NME5P56597 212 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 CUL3Q13618 768 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 TMEM31Q5JXX7 168 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 PRAMEF9Q5VWM5 478 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 NEK5Q6P3R8 708 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 CRTC3Q6UUV7 619 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 Q6ZSR9 355 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 NUDT18Q6ZVK8 323 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 ZNF765Q7L2R6 523 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 C11orf96Q7Z7L8 435 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 PARP9Q8IXQ6 854 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 RAB7BQ96AH8 199 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 GABRG3Q99928 467 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 CCM2Q9BSQ5 444 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 THTPAQ9BU02 230 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 ATG10Q9H0Y0 220 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 TM7SF3Q9NS93 570 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 FARSBQ9NSD9 589 aaKnown RBP13.28□□□□□ -0.28
CDC42-202ENST00000344548 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDC42-202ENST00000344548 FBXL12Q9NXK8 326 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 PACSIN3Q9UKS6 424 aa13.28□□□□□ -0.28
CDC42-202ENST00000344548 COLQQ9Y215 455 aaPredicted RBP13.28□□□□□ -0.28
CDC42-202ENST00000344548 LOC730098B7Z3J9 87 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 AIM2O14862 343 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 ATG13O75143 517 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 PEX11AO75192 247 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 ENTPD5O75356 428 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 ATP6V1G2O95670 118 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 S100BP04271 92 aaPredicted RBP13.27□□□□□ -0.28
CDC42-202ENST00000344548 C5AR1P21730 350 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 HNRNPH1P31943 449 aaKnown RBP13.27□□□□□ -0.28
CDC42-202ENST00000344548 ERFP50548 548 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 DIO3P55073 304 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 PREPLQ4J6C6 727 aaPredicted RBP13.27□□□□□ -0.28
CDC42-202ENST00000344548 PNCKQ6P2M8 343 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 DOK6Q6PKX4 331 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 HEATR4Q86WZ0 1026 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 TRAPPC5Q8IUR0 188 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 FUNDC1Q8IVP5 155 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.28
CDC42-202ENST00000344548 OR2T3Q8NH03 318 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 TUBGCP3Q96CW5 907 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 TRIM39Q9HCM9 518 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 SLC23A2Q9UGH3 650 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 BAIAP2L1Q9UHR4 511 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 RNF11Q9Y3C5 154 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 OR1A2Q9Y585 309 aa13.27□□□□□ -0.28
CDC42-202ENST00000344548 TNPO3Q9Y5L0 923 aaKnown RBP13.27□□□□□ -0.28
CDC42-202ENST00000344548 A0A088AWK7 358 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 FFAR3O14843 346 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 GPR42O15529 346 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 MBTPS2O43462 519 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 TM7SF2O76062 418 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 FUCA1P04066 466 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 ANXA5P08758 320 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 MPC1LP0DKB6 136 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 UROSP10746 265 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 HOXB2P14652 356 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 PGM1P36871 562 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 BDKRB1P46663 353 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 MXRA7P84157 204 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 TFF2Q03403 129 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 ABRAXAS2Q15018 415 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 PTCHD3Q3KNS1 767 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 XKR7Q5GH72 579 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 PAOXQ6QHF9 649 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 FAM83HQ6ZRV2 1179 aaPredicted RBP13.27□□□□□ -0.29
CDC42-202ENST00000344548 CFAP206Q8IYR0 622 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 AFAP1L2Q8N4X5 818 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 METTL6Q8TCB7 284 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 NUDT8Q8WV74 236 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 RCN3Q96D15 328 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 CMTM5Q96DZ9 223 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 NRTNQ99748 197 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 CCDC167Q9P0B6 97 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 OPTCQ9UBM4 332 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 TMCO1Q9UM00 188 aa13.27□□□□□ -0.29
CDC42-202ENST00000344548 K7EPI3 171 aa13.26□□□□□ -0.29
CDC42-202ENST00000344548 EIF3FO00303 357 aaPredicted RBP13.26□□□□□ -0.29
CDC42-202ENST00000344548 NPC1O15118 1278 aa13.26□□□□□ -0.29
CDC42-202ENST00000344548 CRCPO75575 148 aa13.26□□□□□ -0.29
CDC42-202ENST00000344548 STK16O75716 305 aa13.26□□□□□ -0.29
CDC42-202ENST00000344548 HGFP14210 728 aa13.26□□□□□ -0.29
CDC42-202ENST00000344548 PTK2BQ14289 1009 aa13.26□□□□□ -0.29
CDC42-202ENST00000344548 NFE2L1Q14494 772 aa13.26□□□□□ -0.29
CDC42-202ENST00000344548 INPP5AQ14642 412 aa13.26□□□□□ -0.29
CDC42-202ENST00000344548 ZNF776Q68DI1 518 aaPredicted RBP13.26□□□□□ -0.29
CDC42-202ENST00000344548 TMEM92Q6UXU6 159 aa13.26□□□□□ -0.29
CDC42-202ENST00000344548 UBTD2Q8WUN7 234 aa13.26□□□□□ -0.29
CDC42-202ENST00000344548 ATP6V1E2Q96A05 226 aa13.26□□□□□ -0.29
CDC42-202ENST00000344548 COX14Q96I36 57 aa13.26□□□□□ -0.29
CDC42-202ENST00000344548 TEX37Q96LM6 180 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms