RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 GPSM1Q86YR5 675 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 MAGEC3Q8TD91 643 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 SREK1Q8WXA9 508 aaKnown RBP15.98■□□□□ 0.15
SNED1-202ENST00000342631 PARVBQ9HBI1 364 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 COPG2Q9UBF2 871 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 SPASTQ9UBP0 616 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 KLF15Q9UIH9 416 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 RAB23Q9ULC3 237 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 OARD1Q9Y530 152 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 PCDHGA5Q9Y5G8 931 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 ATXN2Q99700 1313 aaKnown RBP15.98■□□□□ 0.15
SNED1-202ENST00000342631 A0A1B0GVT2 93 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 PABPN1LA6NDY0 278 aaKnown RBP15.98■□□□□ 0.15
SNED1-202ENST00000342631 TK2O00142 265 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 DFNA5O60443 496 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 SMIM24O75264 130 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 MYL2P10916 166 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 CPA3P15088 417 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 ACTR1BP42025 376 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 HALP42357 657 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 AP1S2P56377 157 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 ACTR1AP61163 376 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 CDKL1Q00532 357 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 IL9RQ01113 521 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 OR4D1Q15615 310 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 PPP1R3AQ16821 1122 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 ABRAXAS1Q6UWZ7 409 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 ZYG11AQ6WRX3 759 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 FRA10AC1Q70Z53 315 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 UBE2R2Q712K3 238 aaPredicted RBP15.98■□□□□ 0.15
SNED1-202ENST00000342631 MCOLN3Q8TDD5 553 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 UNKQ9C0B0 810 aaKnown RBP15.98■□□□□ 0.15
SNED1-202ENST00000342631 CPSF2Q9P2I0 782 aaKnown RBP15.98■□□□□ 0.15
SNED1-202ENST00000342631 PLEKHM1Q9Y4G2 1056 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 HEBP2Q9Y5Z4 205 aa15.98■□□□□ 0.15
SNED1-202ENST00000342631 TP53BP1Q12888 1972 aaPredicted RBP15.97■□□□□ 0.15
SNED1-202ENST00000342631 CACNA1EQ15878 2313 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 HIST1H2AGP0C0S8 130 aaPredicted RBP15.97■□□□□ 0.15
SNED1-202ENST00000342631 SLC2A4P14672 509 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 HIST1H2ADP20671 130 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 MAP4P27816 1152 aaKnown RBP15.97■□□□□ 0.15
SNED1-202ENST00000342631 SERPINB4P48594 390 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 ATP1A2P50993 1020 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 PRKAA2P54646 552 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 WDR4P57081 412 aaKnown RBP15.97■□□□□ 0.15
SNED1-202ENST00000342631 ASPHQ12797 758 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 ABRQ12979 859 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 TGFBIQ15582 683 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 IL27RAQ6UWB1 636 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 NRROSQ86YC3 692 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 SLC22A9Q8IVM8 553 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 MDM1Q8TC05 714 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 TFGQ92734 400 aaPredicted RBP15.97■□□□□ 0.15
SNED1-202ENST00000342631 HIST1H2AHQ96KK5 128 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 HIST1H2AJQ99878 128 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 H2AFJQ9BTM1 129 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 LRFN3Q9BTN0 628 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 ZDHHC5Q9C0B5 715 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 WWP1Q9H0M0 922 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 IRF2BPLQ9H1B7 796 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 C12orf65Q9H3J6 166 aaKnown RBP15.97■□□□□ 0.15
SNED1-202ENST00000342631 NUDT4Q9NZJ9 180 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 IKZF3Q9UKT9 509 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 ST14Q9Y5Y6 855 aa15.97■□□□□ 0.15
SNED1-202ENST00000342631 OR5K4A6NMS3 321 aa15.96■□□□□ 0.15
SNED1-202ENST00000342631 G3V2L1 256 aa15.96■□□□□ 0.15
SNED1-202ENST00000342631 RRP9O43818 475 aaKnown RBP15.96■□□□□ 0.15
SNED1-202ENST00000342631 EPN2O95208 641 aa15.96■□□□□ 0.15
SNED1-202ENST00000342631 BPGMP07738 259 aa15.96■□□□□ 0.15
SNED1-202ENST00000342631 SBK3P0C264 359 aa15.96■□□□□ 0.15
SNED1-202ENST00000342631 ATP5F1P24539 256 aaPredicted RBP15.96■□□□□ 0.15
SNED1-202ENST00000342631 RXRGP48443 463 aa15.96■□□□□ 0.15
SNED1-202ENST00000342631 ARRB1P49407 418 aaPredicted RBP15.96■□□□□ 0.15
SNED1-202ENST00000342631 NFKB2Q00653 900 aa15.96■□□□□ 0.15
SNED1-202ENST00000342631 KIF19Q2TAC6 998 aa15.96■□□□□ 0.15
SNED1-202ENST00000342631 PRRT3Q5FWE3 981 aa15.96■□□□□ 0.15
SNED1-202ENST00000342631 TTC23LQ6PF05 361 aa15.96■□□□□ 0.15
SNED1-202ENST00000342631 GKN2Q86XP6 184 aa15.96■□□□□ 0.15
SNED1-202ENST00000342631 SPNS2Q8IVW8 549 aa15.96■□□□□ 0.15
SNED1-202ENST00000342631 LRRC61Q9BV99 259 aa15.96■□□□□ 0.15
SNED1-202ENST00000342631 PDZK1P1A8MUH7 402 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 YKT6O15498 198 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 KLK8O60259 260 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 F3P13726 295 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 AK4P27144 223 aaPredicted RBP15.96■□□□□ 0.14
SNED1-202ENST00000342631 RPL10P27635 214 aaKnown RBP15.96■□□□□ 0.14
SNED1-202ENST00000342631 PI4KAP42356 2102 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 KCNC1P48547 511 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 RPIAP49247 311 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 IRX4P78413 519 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 TUBB8Q3ZCM7 444 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 ZNF542PQ5EBM4 170 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 SLC23A3Q6PIS1 610 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 TAF8Q7Z7C8 310 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 TRIM42Q8IWZ5 723 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 TBC1D21Q8IYX1 336 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 MGARPQ8TDB4 240 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 DYDC1Q8WWB3 177 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 RMDN2Q96LZ7 410 aa15.96■□□□□ 0.14
SNED1-202ENST00000342631 TCEAL2Q9H3H9 227 aaPredicted RBP15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms