RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 HCN4Q9Y3Q4 1203 aa16.98■□□□□ 0.31
CLDN4-201ENST00000340958 ANGPTL3Q9Y5C1 460 aa16.98■□□□□ 0.31
CLDN4-201ENST00000340958 SLC5A10A0PJK1 596 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 GPR89AB7ZAQ6 455 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 SLCO1B7G3V0H7 640 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 KMOO15229 486 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 DIAPH2O60879 1101 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 LILRB5O75023 590 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 GPR89BP0CG08 455 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 HNRNPA2B1P22626 353 aaKnown RBP16.97■□□□□ 0.31
CLDN4-201ENST00000340958 AKT2P31751 481 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 MAPK9P45984 424 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 HK2P52789 917 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 CLDN2P57739 230 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 ARHGAP8P85298 464 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 CCDC121Q6ZUS5 278 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 ZNF547Q8IVP9 402 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 LSMEM2Q8N112 164 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 LILRA3Q8N6C8 439 aaPredicted RBP16.97■□□□□ 0.31
CLDN4-201ENST00000340958 DTWD2Q8NBA8 298 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 ESAMQ96AP7 390 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 RMDN2Q96LZ7 410 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 LRRC37BQ96QE4 947 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 HGH1Q9BTY7 390 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 SLC12A9Q9BXP2 914 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 RDH14Q9HBH5 336 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 MID1IP1Q9NPA3 183 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 VTI1BQ9UEU0 232 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 EIF2B4Q9UI10 523 aaKnown RBP16.97■□□□□ 0.31
CLDN4-201ENST00000340958 DMDP11532 3685 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 MYO15AQ9UKN7 3530 aa16.97■□□□□ 0.31
CLDN4-201ENST00000340958 CCNT2O60583 730 aaKnown RBP16.96■□□□□ 0.31
CLDN4-201ENST00000340958 CATP04040 527 aaKnown RBP16.96■□□□□ 0.31
CLDN4-201ENST00000340958 PDHA2P29803 388 aa16.96■□□□□ 0.31
CLDN4-201ENST00000340958 CD6P30203 668 aa16.96■□□□□ 0.31
CLDN4-201ENST00000340958 CCR3P51677 355 aa16.96■□□□□ 0.31
CLDN4-201ENST00000340958 CLCQ05315 142 aa16.96■□□□□ 0.31
CLDN4-201ENST00000340958 NFE2L1Q14494 772 aa16.96■□□□□ 0.31
CLDN4-201ENST00000340958 CHST15Q7LFX5 561 aaPredicted RBP16.96■□□□□ 0.31
CLDN4-201ENST00000340958 TRPM8Q7Z2W7 1104 aa16.96■□□□□ 0.31
CLDN4-201ENST00000340958 SLC22A15Q8IZD6 547 aa16.96■□□□□ 0.31
CLDN4-201ENST00000340958 KIRREL3Q8IZU9 778 aa16.96■□□□□ 0.31
CLDN4-201ENST00000340958 PDPRQ8NCN5 879 aa16.96■□□□□ 0.31
CLDN4-201ENST00000340958 DENND6BQ8NEG7 585 aa16.96■□□□□ 0.31
CLDN4-201ENST00000340958 DLG3Q92796 817 aa16.96■□□□□ 0.31
CLDN4-201ENST00000340958 ATP6V1E2Q96A05 226 aa16.96■□□□□ 0.31
CLDN4-201ENST00000340958 NSUN5Q96P11 429 aaKnown RBP16.96■□□□□ 0.31
CLDN4-201ENST00000340958 KCNK13Q9HB14 408 aa16.96■□□□□ 0.31
CLDN4-201ENST00000340958 PDE10AQ9Y233 779 aa16.96■□□□□ 0.31
CLDN4-201ENST00000340958 CACNA1HO95180 2353 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 CCT8L1PA6NM43 557 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 CHUKO15111 745 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 APBB3O95704 486 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 MLYCDO95822 493 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 HTR1BP28222 390 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 RPS9P46781 194 aaKnown RBP16.96■□□□□ 0.3
CLDN4-201ENST00000340958 HSPA7P48741 367 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 GALNT1Q10472 559 aaPredicted RBP16.96■□□□□ 0.3
CLDN4-201ENST00000340958 LCP2Q13094 533 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 GALNT13Q8IUC8 556 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 PRSS33Q8NF86 280 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 OR56A4Q8NGH8 313 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 RLN3Q8WXF3 142 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 SNX19Q92543 992 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 FAR2Q96K12 515 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 PPP1R36Q96LQ0 422 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 GPR174Q9BXC1 333 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 C6orf106Q9H6K1 298 aaPredicted RBP16.96■□□□□ 0.3
CLDN4-201ENST00000340958 HEY2Q9UBP5 337 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 APOBEC2Q9Y235 224 aaKnown RBP16.96■□□□□ 0.3
CLDN4-201ENST00000340958 GPSM3Q9Y4H4 160 aa16.96■□□□□ 0.3
CLDN4-201ENST00000340958 DNMT3AQ9Y6K1 912 aaPredicted RBP16.96■□□□□ 0.3
CLDN4-201ENST00000340958 NUMA1Q14980 2115 aa16.95■□□□□ 0.3
CLDN4-201ENST00000340958 VPS13AQ96RL7 3174 aa16.95■□□□□ 0.3
CLDN4-201ENST00000340958 HDAC3O15379 428 aa16.95■□□□□ 0.3
CLDN4-201ENST00000340958 GALR2O43603 387 aaPredicted RBP16.95■□□□□ 0.3
CLDN4-201ENST00000340958 NDUFS2O75306 463 aa16.95■□□□□ 0.3
CLDN4-201ENST00000340958 RPS17P08708 135 aaKnown RBP16.95■□□□□ 0.3
CLDN4-201ENST00000340958 PXNP49023 591 aaPredicted RBP16.95■□□□□ 0.3
CLDN4-201ENST00000340958 PDCD2Q16342 344 aaPredicted RBP16.95■□□□□ 0.3
CLDN4-201ENST00000340958 C18orf21Q32NC0 220 aaPredicted RBP16.95■□□□□ 0.3
CLDN4-201ENST00000340958 KIAA0895LQ68EN5 471 aa16.95■□□□□ 0.3
CLDN4-201ENST00000340958 MBOAT1Q6ZNC8 495 aa16.95■□□□□ 0.3
CLDN4-201ENST00000340958 TCAIMQ8N3R3 496 aa16.95■□□□□ 0.3
CLDN4-201ENST00000340958 SPEM1Q8N4L4 309 aa16.95■□□□□ 0.3
CLDN4-201ENST00000340958 RMI1Q9H9A7 625 aa16.95■□□□□ 0.3
CLDN4-201ENST00000340958 DNAJC28Q9NX36 388 aa16.95■□□□□ 0.3
CLDN4-201ENST00000340958 OPTCQ9UBM4 332 aa16.95■□□□□ 0.3
CLDN4-201ENST00000340958 PTBP2Q9UKA9 531 aaKnown RBP16.95■□□□□ 0.3
CLDN4-201ENST00000340958 PCTPQ9UKL6 214 aa16.95■□□□□ 0.3
CLDN4-201ENST00000340958 CA5BQ9Y2D0 317 aa16.95■□□□□ 0.3
CLDN4-201ENST00000340958 POM121BA6NF01 834 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 GFYI3L273 518 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 MATN2O00339 956 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 MATN4O95460 622 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 IGLV3-19P01714 112 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 ACP5P13686 325 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 KELP23276 732 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 THOP1P52888 689 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 AP1S2P56377 157 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms